CX299906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSJ (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica GN=ATG8C PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 5.268e-56 Identity = 106/117 (90.60%), Postives = 113/117 (96.58%), Query Frame = 1 Query: 34 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 MA+SSFKLEHPLERR AE+ RIREKYPDRIPVIVEKAE++D+PDI KKKYLVPADL+VGQFVYVVRKRIKLSAEKAIF+FVKNTLPPT ALMSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8C_ORYSI (Autophagy-related protein 8C OS=Oryza sativa subsp. indica GN=ATG8C PE=3 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 5.268e-56 Identity = 106/117 (90.60%), Postives = 113/117 (96.58%), Query Frame = 1 Query: 34 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 MA+SSFKLEHPLERR AE+ RIREKYPDRIPVIVEKAE++D+PDI KKKYLVPADL+VGQFVYVVRKRIKLSAEKAIF+FVKNTLPPT ALMSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 1 MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSJ (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica GN=ATG8A PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 4.460e-55 Identity = 106/117 (90.60%), Postives = 112/117 (95.73%), Query Frame = 1 Query: 34 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 MA++SFKLEHPLERR AESARIREKY DRIPVIVEKA+KTDVP+I KKKYLVPADL+VGQFVYVVRKRIKLS EKAIFVFVKNTLPPT +LMSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8A_ORYSI (Autophagy-related protein 8A OS=Oryza sativa subsp. indica GN=ATG8A PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 4.460e-55 Identity = 106/117 (90.60%), Postives = 112/117 (95.73%), Query Frame = 1 Query: 34 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 MA++SFKLEHPLERR AESARIREKY DRIPVIVEKA+KTDVP+I KKKYLVPADL+VGQFVYVVRKRIKLS EKAIFVFVKNTLPPT +LMSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8C_ARATH (Autophagy-related protein 8c OS=Arabidopsis thaliana GN=ATG8C PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.298e-54 Identity = 104/117 (88.89%), Postives = 112/117 (95.73%), Query Frame = 1 Query: 34 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 MA SSFKLEHPLERR ES+RIREKYPDRIPVIVE+AE++DVP+I KKKYLVPADL+VGQFVYVVRKRIKLSAEKAIFVFVKNTLPPT A+MSAIY+ENKDEDGFLYMTYSGENTFG Sbjct: 1 MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSJ (Autophagy-related protein 8B OS=Oryza sativa subsp. japonica GN=ATG8B PE=3 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 1.435e-53 Identity = 103/117 (88.03%), Postives = 110/117 (94.02%), Query Frame = 1 Query: 34 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 MAKSSFKL+H LERR AE+ RIREKY DRIPVIVEKAE++D+PDI KKKYLVPADL+VGQFVYVVRKRIKLS EKAIF+FVKNTLPPT ALMSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8B_ORYSI (Autophagy-related protein 8B OS=Oryza sativa subsp. indica GN=ATG8B PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 1.435e-53 Identity = 103/117 (88.03%), Postives = 110/117 (94.02%), Query Frame = 1 Query: 34 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 MAKSSFKL+H LERR AE+ RIREKY DRIPVIVEKAE++D+PDI KKKYLVPADL+VGQFVYVVRKRIKLS EKAIF+FVKNTLPPT ALMSAIYEENKDEDGFLYMTYSGENTFG Sbjct: 1 MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFG 117
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8A_ARATH (Autophagy-related protein 8a OS=Arabidopsis thaliana GN=ATG8A PE=1 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 4.174e-53 Identity = 102/117 (87.18%), Postives = 111/117 (94.87%), Query Frame = 1 Query: 34 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFG 384 MAKSSFK+ +PLE R++ES+RIREKYPDRIPVIVEKA ++DVPDI KKKYLVPADL+VGQFVYVVRKRIKL AEKAIFVFVKNTLPPT ALMSAIYEE+KDEDGFLYMTYSGENTFG Sbjct: 1 MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8D_ARATH (Autophagy-related protein 8d OS=Arabidopsis thaliana GN=ATG8D PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 2.705e-52 Identity = 101/120 (84.17%), Postives = 111/120 (92.50%), Query Frame = 1 Query: 34 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGWSF 393 MA SSFK EHPLE+R AE+ARIREKYPDRIPVIVE+AEK+DVPDI +KKYLVPADL+VGQFVYVVRKRIKLS EKAIF+FVKN LPPT A+MSAIYEE+KDEDGFLYM+YSGENTFG F Sbjct: 1 MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGIFF 120
BLAST of CX299906 vs. ExPASy Swiss-Prot
Match: ATG8B_ARATH (Autophagy-related protein 8b OS=Arabidopsis thaliana GN=ATG8B PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 3.533e-52 Identity = 100/120 (83.33%), Postives = 110/120 (91.67%), Query Frame = 1 Query: 34 MAKSSFKLEHPLERRLAESARIREKYPDRIPVIVEKAEKTDVPDIHKKKYLVPADLSVGQFVYVVRKRIKLSAEKAIFVFVKNTLPPTGALMSAIYEENKDEDGFLYMTYSGENTFGWSF 393 M K+SFKL +PLE R+AES RIR KYP+R+PVIVEKA ++DVPDI KKKYLVPADL++GQFVYVVRKRIKL AEKAIFVFVKNTLPPT ALMSAIYEE+KDEDGFLYMTYSGENTFG SF Sbjct: 1 MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGSF 120 The following BLAST results are available for this feature:
BLAST of CX299906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CX299906 ID=CX299906; Name=CX299906; organism=Citrus clementina; type=EST; length=491bpback to top |