CX299915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299915 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 5.252e-42 Identity = 78/118 (66.10%), Postives = 97/118 (82.20%), Query Frame = 1 Query: 1 AKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGTG 354 A GGV+P+HTHPAASE+L V G + AGFI+SS+NTVY +TL GDIM+FPQGLLH+Q N+G A+ V+F+ PNPGLQITD+ALFANNL S +VE+ TFLDDA VK+LK +LGG+G Sbjct: 96 AVGGVVPLHTHPAASELLFVTQGTVAAGFITSSSNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPGLQITDYALFANNLPSAIVEKVTFLDDAQVKKLKSVLGGSG 213
BLAST of CX299915 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 5.807e-41 Identity = 81/115 (70.43%), Postives = 95/115 (82.61%), Query Frame = 1 Query: 7 GGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGT 351 GGVIP HTHP ASE+LLVV G I AGF++S NT Y+KTLKKGDIM+FPQGLLHFQVN G AL F SF+SP+PGLQI DFALF N+L ++L+ QTTFLD A +K+LKG+LGGT Sbjct: 95 GGVIPFHTHPGASEVLLVVQGTIIAGFVASD-NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQILDFALFKNDLPTELIAQTTFLDAAQIKKLKGVLGGT 208
BLAST of CX299915 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 3.764e-40 Identity = 82/117 (70.09%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 1 AKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGT 351 A GGVIP+HTHP ASE+L+V+ G I AGFISS AN VY+KTL +GD M+FPQGLLHFQ+NSG AL FV+F S +PGLQI FALFAN+L S+LVE TTFL DA VK+LKG+LGGT Sbjct: 95 AGGGVIPLHTHPGASEVLVVIQGTICAGFISS-ANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLPSELVEATTFLSDAEVKKLKGVLGGT 210
BLAST of CX299915 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 4.916e-40 Identity = 81/118 (68.64%), Postives = 95/118 (80.51%), Query Frame = 1 Query: 1 AKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGTG 354 A GVIPMHTHP ASE+L V+ G ITAGF+SS AN VYV+TLK G +M+FPQGLLHFQ+N+G A V+FNS NPGLQI DFALFAN+L ++LV TTFLD TVK+LKG+LGGTG Sbjct: 92 APKGVIPMHTHPGASEVLFVLTGSITAGFVSS-ANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALFANSLPTELVVGTTFLDATTVKKLKGVLGGTG 208
BLAST of CX299915 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.430e-39 Identity = 81/117 (69.23%), Postives = 95/117 (81.20%), Query Frame = 1 Query: 1 AKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGT 351 A GGVIP+HTHP ASE+L+V+ G I AGFISS AN VY+KTL +GD M+FPQGLLHFQ+NSG AL FV+F S +PGLQI FALFAN+L S+LVE TTFL D VK+LKG+LGGT Sbjct: 95 AGGGVIPLHTHPGASEVLVVIQGTICAGFISS-ANKVYLKTLSRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDLPSELVEATTFLSDEEVKKLKGVLGGT 210
BLAST of CX299915 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.440e-39 Identity = 81/118 (68.64%), Postives = 95/118 (80.51%), Query Frame = 1 Query: 1 AKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGTG 354 A GVIPMHTHP ASE+L V+ G ITAGFISS AN+VYV+TLK G +M+FPQGLLHFQ+N+G A V+F+S +PGLQI DFALFAN LS++LV TTFL ATVK LKG+LGGTG Sbjct: 91 APKGVIPMHTHPGASEVLFVLDGSITAGFISS-ANSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPGLQILDFALFANTLSTELVSATTFLPPATVKTLKGVLGGTG 207
BLAST of CX299915 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 5.435e-39 Identity = 76/115 (66.09%), Postives = 94/115 (81.74%), Query Frame = 1 Query: 7 GGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGT 351 GGV+P HTHP ASE+LLVV G I AGF++S NT Y+KTLKKGDI++FPQGLLHFQVN G A+ F SF+SP+PGLQI DFALF N+L+++L+ QTT LD +K+LKG+LGGT Sbjct: 95 GGVVPFHTHPGASEVLLVVQGTIIAGFVASD-NTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGLQIVDFALFKNDLATELIAQTTLLDAPQIKKLKGVLGGT 208
BLAST of CX299915 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 4.601e-38 Identity = 75/117 (64.10%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 1 AKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGT 351 A GGV+P HTHP ASE+L+V G I AGF++S NT Y++TL+KGDIM+FPQGLLHFQVN G AL F SF S +PGLQI DFALF N+L ++++ QTTFLD A +K+LKG+LGGT Sbjct: 98 AVGGVVPFHTHPGASEVLIVAQGTICAGFVASD-NTPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQILDFALFKNDLPTEVIAQTTFLDAAQIKKLKGVLGGT 213
BLAST of CX299915 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.613e-33 Identity = 67/116 (57.76%), Postives = 86/116 (74.14%), Query Frame = 1 Query: 7 GGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFALFANNLSSQLVEQTTFLDDATVKRLKGILGGTG 354 GGV+P+HTHPA SE+L V+ G + AGFISSS N VY K + KG + +FPQGLLHFQ N+G A+ F +++S NPGLQI D+ALFANNL + V + TFL +A V+RLK GG+G Sbjct: 104 GGVVPLHTHPAGSELLYVLDGALVAGFISSSDNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPGLQILDYALFANNLPTSYVVKGTFLAEAEVRRLKSKFGGSG 219
BLAST of CX299915 vs. ExPASy Swiss-Prot
Match: GLP1_IPONI (Germin-like protein OS=Ipomoea nil GN=GLP PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.100e-23 Identity = 65/118 (55.08%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 1 AKGGVIPMHTHPAASEILLVVHGCITAGFISSSANTVYVKTLKKGDIMIFPQGLLHFQVNSGADGALGFVSFNSPNPGLQITDFA-LFANNLSSQLVEQTTFLDDATVKRLKGILGGT 351 A GGVIPMHTHP ASEIL VV G I A FI SS N VY K L GD+M+FPQGLL FQ +G A G NPGLQI +F F + + TT LD+AT+K+LK LGGT Sbjct: 98 APGGVIPMHTHPGASEILNVVEGTILAAFI-SSGNKVYEKALYPGDVMVFPQGLLDFQEITGKI-APGLCELRQRNPGLQILEFQHCFPTIFPPKTIAGTTCLDEATIKKLKSGLGGT 213 The following BLAST results are available for this feature:
BLAST of CX299915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299915 ID=CX299915; Name=CX299915; organism=Citrus clementina; type=EST; length=529bpback to top |