CX299928
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX299928 vs. ExPASy Swiss-Prot
Match: CLPS_SYNE7 (ATP-dependent Clp protease adapter protein clpS OS=Synechococcus elongatus (strain PCC 7942) GN=clpS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.107e-19 Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 232 KRKTSPPYRVILHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIVCSQADAEEHCMQLRGNGLLSSIEP 471 KRK +P YRV+LHND+FN EYVV VLM+ +P +T AV+IM EAH NG +VI C AE +C QL+ +GL SSIEP Sbjct: 14 KRKIAPRYRVLLHNDDFNPMEYVVMVLMQTVPSLTQPQAVDIMMEAHTNGTGLVITCDIEPAEFYCEQLKSHGLSSSIEP 93
BLAST of CX299928 vs. ExPASy Swiss-Prot
Match: CLPS_SYNP6 (ATP-dependent Clp protease adapter protein clpS OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpS PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17 Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 1 Query: 232 KRKTSPPYRVILHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIVCSQADAEEHCMQLRGNGL 453 KRK +P YRV+LHND+FN EYVV VLM+ +P +T AV+IM EAH NG +VI C AE +C QL+ +GL Sbjct: 14 KRKIAPRYRVLLHNDDFNPMEYVVMVLMQTVPSLTQPQAVDIMMEAHTNGTGLVITCDIEPAEFYCEQLKSHGL 87
BLAST of CX299928 vs. ExPASy Swiss-Prot
Match: CLPS_SYNS9 (ATP-dependent Clp protease adapter protein clpS OS=Synechococcus sp. (strain CC9902) GN=clpS PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14 Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 1 Query: 172 LLERPVITAPGRESEFDL--KKKRKTSPPYRVILHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIVCSQADAEEHCMQLRGNGLLSSIEP 471 + E +PG + D ++ RK SP Y+V+LHND N EYV+ L +V+P ++ +A+ +M EAH G+ +VIVC AE +C L+ GL SSIEP Sbjct: 1 MAEETPTRSPGGAAVLDKAPERVRKRSPRYKVLLHNDPVNSMEYVMTTLRQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDIEPAEFYCETLKSKGLTSSIEP 102
BLAST of CX299928 vs. ExPASy Swiss-Prot
Match: CLPS_GLOVI (ATP-dependent Clp protease adapter protein clpS OS=Gloeobacter violaceus GN=clpS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.255e-12 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 232 KRKTSPPYRVILHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIVCSQADAEEHCMQLRGNGLLSSIEP 471 +RK P Y+V+LHND+ YV++VLMK IP M A IM EAH G++VVIVC+ AE + L + L S+ EP Sbjct: 12 QRKPMPLYKVLLHNDDHTPMNYVIEVLMKTIPKMQPSKARKIMLEAHNGGVAVVIVCALEHAEFYSESLNRHNLTSTYEP 91
BLAST of CX299928 vs. ExPASy Swiss-Prot
Match: CLPS_PROM5 (ATP-dependent Clp protease adapter protein clpS OS=Prochlorococcus marinus (strain MIT 9515) GN=clpS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12 Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 1 Query: 235 RKTSPPYRVILHNDNFNKREYVVQVLMKVIPGMTLDNAVNIMQEAHYNGLSVVIVCSQADAEEHCMQLRGNGLLSSIE 468 + SP Y+V+LHND N EY+ L +V+P ++ +A+ IM EAH NG+ +VIVC AE + L+ G+ SSIE Sbjct: 25 KNKSPKYKVLLHNDPVNSMEYITIALREVVPQLSEQDAIAIMLEAHNNGVGLVIVCDLEPAEFYSESLKSKGISSSIE 102 The following BLAST results are available for this feature:
BLAST of CX299928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX299928 ID=CX299928; Name=CX299928; organism=Citrus clementina; type=EST; length=681bpback to top |