CX308733
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308733 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.984e-20 Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = -3 Query: 2 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSPYPEFGRTDT----KREVAAFFAHVTHETTDFCFVEEISKTNPY 217 T FF+GIKNQA + CEGK FYTR AF+SA++ YP F T KRE+AAFFAHVTHET FC++ EI+K+N Y Sbjct: 85 TDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEINKSNAY 160
BLAST of CX308733 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.526e-19 Identity = 44/76 (57.89%), Postives = 54/76 (71.05%), Query Frame = -3 Query: 2 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSPYPEF----GRTDTKREVAAFFAHVTHETTDFCFVEEISKTNPY 217 T FF+GIKNQA + CEGK FYTR AF+SA+ YP F + KRE+AAFFAH THET FC++ EI+K+N Y Sbjct: 74 TSSFFNGIKNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEINKSNAY 149
BLAST of CX308733 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.221e-18 Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = -3 Query: 20 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSPYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEI 217 TPEFF + QA C KGFYTRDAF++A YP FGRT D+KRE+AAFFAH HET FC++EEI Sbjct: 73 TPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEI 142
BLAST of CX308733 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.033e-17 Identity = 41/70 (58.57%), Postives = 52/70 (74.29%), Query Frame = -3 Query: 20 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSPYPEFGRT----DTKREVAAFFAHVTHETTDFCFVEEI 217 T +F +GI +QA + C GK FYTRDAF+SAL+ Y +FGR D+KRE+AA FAH THET FC++EEI Sbjct: 73 TADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGHFCYIEEI 142
BLAST of CX308733 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.532e-16 Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = -3 Query: 23 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSPYPEFGR----TDTKREVAAFFAHVTHETTDFCFVEE 217 T EF+DGI +QA A C GK FYTR F+ A+S YP FG D KRE+AA+FAHVTHET C++EE Sbjct: 51 TQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEE 119
BLAST of CX308733 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.532e-16 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = -3 Query: 17 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSPYPEFGRTDTKREVAAFFAHVTHETTDFCFVEEIS 217 T FF+GI NQA C GK FYTRD+FI+A + +P F + T+RE+A FAH THET FC++EEI+ Sbjct: 77 TQAFFNGIINQAGGGCAGKNFYTRDSFINAANTFPNFANSVTRREIATMFAHFTHETGHFCYIEEIN 143
BLAST of CX308733 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.001e-16 Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = -3 Query: 17 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSPYPEFGR----TDTKREVAAFFAHVTHETTDFCFVEEIS 217 T FF+GIKNQAP C GK FYTR +F++A Y F R D+KRE+AAFFAHVTHET C++ EI+ Sbjct: 92 TEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGHMCYINEIN 162
BLAST of CX308733 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 2.614e-16 Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = -3 Query: 8 TPEFFDGIKNQAPATCEGKGFYTRDAFISALSPYPEFG----RTDTKREVAAFFAHVTHETTDFCFVEEISKTN 217 T FF+GIKNQAP C GK FYTR +F++A Y F D+KRE+AAFFAHVTHET C++ EI+ N Sbjct: 89 TEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGAN 162
BLAST of CX308733 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.930e-15 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = -3 Query: 23 FFDGIKNQAPATCEGKGFYTRDAFISALSPYPEFGR----TDTKREVAAFFAHVTHETTDFCFVEE 208 FFDGI QA A+C GK FYTR AF+SA+ P+FG D KRE+AAFFAH++HETT+ C +EE Sbjct: 95 FFDGIIGQAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEE 158 The following BLAST results are available for this feature:
BLAST of CX308733 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308733 ID=CX308733; Name=CX308733; organism=Citrus clementina; type=EST; length=222bpback to top |