CX308789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2) HSP 1 Score: 261.536 bits (667), Expect = 2.707e-69 Identity = 137/233 (58.80%), Postives = 170/233 (72.96%), Query Frame = -2 Query: 1 DQFPAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR--------------GSDEI-EYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 654 + FP+GLRVLVVDDD T ILE+MLR CLY VT C++A +AL++LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+ HGA DYLIKP+R E LKNIWQHVVRKR +E E+SGS+EET ++ G D + + +SSVNEG + RKR + E+ G+ + +D S KKPRVVWSVELHQQFV+AVNQLG++KA Sbjct: 31 EMFPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRKRRSEWSVPEHSGSIEETGERQQQQHRGGGGGAAVSGGEDAVDDNSSSVNEGNNWR-SSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKA 262
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 8.708e-68 Identity = 136/226 (60.18%), Postives = 166/226 (73.45%), Query Frame = -2 Query: 1 DQFPAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNE-NKEHENSGSLEET-------DHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 654 D FPA LRVLVVDDD T ILE+ML CLY VT C++A AL++LR+ K FD+V+SDVHMPDMDGFKLLEH+GLEMDLPVIMMSAD S V++G+ HGA DYLIKP+R E LKNIWQHVVRK+ NE N + GS+E+T H+ +D +SSVNEG ++ RKR + +D G+ + +D S+ KKPRVVWSVELHQQFV+AVNQLG+DKA Sbjct: 22 DPFPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDAD--NNSSSVNEGNG---RSSRKRKEEEVDDQGD-DKEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKA 241
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: ARR14_ARATH (Two-component response regulator ARR14 OS=Arabidopsis thaliana GN=ARR14 PE=1 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 4.472e-64 Identity = 133/223 (59.64%), Postives = 156/223 (69.96%), Query Frame = -2 Query: 1 DQFPAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIG-LEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESD----DPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 654 DQFP+GLR+LVVDDD + ILE+ML R +Y VT CSQA VAL ILRERK FD+VLSDVHMP M+G+ LL+ +G LEMDLPVIMMS DGR + VM GI HGACDYLIKPIR EELKNIWQHVVR++ KE +S +LE D+ GS E S E K + K+ K D + D DP +KK RVVWS+ELHQQFV+AVN+LGIDKA Sbjct: 5 DQFPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHMPGMNGYNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQHVVRRKCVMKKELRSSQALE--DNKNSGSLETVVVSVSECSEESLMKCRNKKKKKKRSVDRDDNEDDLLLDPGNSKKSRVVWSIELHQQFVNAVNKLGIDKA 225
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: ARR12_ARATH (Two-component response regulator ARR12 OS=Arabidopsis thaliana GN=ARR12 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.140e-59 Identity = 122/220 (55.45%), Postives = 152/220 (69.09%), Query Frame = -2 Query: 1 DQFPAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISA--KEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 654 DQFP G+RVL VDDD T +ILE +LR C Y+VTT +QA AL +LRE K FD+V+SDV MPDMDGFKLLE +GLEMDLPVIM+SA VM+G+ HGACDYL+KP+R EELKNIWQHVVR R+++N+ N+G D +E S N G K RKR ++ED+ ++DD KK RVVW+VELH++FV+AVNQLG +KA Sbjct: 11 DQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELKNIWQHVVRSRFDKNRGSNNNG-----DKRDGSGNEGVGNSDPNNG-----KGNRKRKDQYNEDEDEDRDDNDDSCAQKKQRVVWTVELHKKFVAAVNQLGYEKA 220
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: ARR11_ARATH (Two-component response regulator ARR11 OS=Arabidopsis thaliana GN=ARR11 PE=1 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 8.169e-58 Identity = 116/216 (53.70%), Postives = 153/216 (70.83%), Query Frame = -2 Query: 7 PAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEI---EYASSVNEGTEGTFKAQRKRISAKEEDDGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGID 645 P GLRVLVVDDD T +ILE+ML++C Y VTTC A AL +LRERK +D+V+SDV+MPDMDGFKLLEH+GLE+DLPVIMMS DG S VM+G++HGACDYL+KPIR +ELK IWQHV+RK+ E ++ E G ++ G+D I + A + G + +F +RK +++ + S++KK RVVWS ELH +FV+AVNQ+G D Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHVLRKKLQEVRDIEGCG-------YEGGADWITRYDEAHFLGGGEDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCD 216
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: ARR10_ARATH (Two-component response regulator ARR10 OS=Arabidopsis thaliana GN=ARR10 PE=1 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.377e-57 Identity = 117/222 (52.70%), Postives = 152/222 (68.47%), Query Frame = -2 Query: 1 DQFPAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRK-RWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGE---LESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 654 DQFP G+RVL VDDD T RIL+ +L+RC Y+VTT +QA AL +LRE K FD+V+SDV MPDMDGFKLLE +GLEMDLPVIM+SA VM+G++HGACDYL+KP+R EELKNIWQHVVRK + +NK S+V+ G+ KA RKR EE++ E ++DDP+ KKPRV+W+ ELH +F++AV+ LG+++A Sbjct: 11 DQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELKNIWQHVVRKSKLKKNK------------------------SNVSNGSGNCDKANRKRKEQYEEEEEEERGNDNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVERA 208
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: ARR18_ARATH (Two-component response regulator ARR18 OS=Arabidopsis thaliana GN=ARR18 PE=2 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 3.675e-50 Identity = 114/221 (51.58%), Postives = 144/221 (65.16%), Query Frame = -2 Query: 1 DQFPAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDG---ELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 654 D+FP G+RVL VDD+ T R LE++L RC Y+VT ++ AL +LRE FD+V+SDV MPD DGFKLLE IGLEMDLPVIM+SA +VM+GI HGACDYL+KP+ +EL+NIW HVV+K K + E+D S + + VN+ + + S +EEDDG E + D T KKPRVVWS ELHQ+FVSAV QLG+DKA Sbjct: 12 DKFPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEMPDTDGFKLLE-IGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHVVKK---NIKSYAKLLPPSESDSVPSASRKRK--DKVNDSGD-------EDDSDREEDDGEGSEQDGDGSGTRKKPRVVWSQELHQKFVSAVQQLGLDKA 219
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSJ (Two-component response regulator EHD1 OS=Oryza sativa subsp. japonica GN=EHD1 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.095e-33 Identity = 74/219 (33.79%), Postives = 123/219 (56.16%), Query Frame = -2 Query: 1 FPAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 648 +P GLRVLV+DDD + ++E +L +C Y VTT A+ + + D+V+SD P DG +L+ + + +P ++M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H A++ + TE + + + +GE+ D K R+ W+ +LH+QF++AVN LG DKA Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEI--TDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKA 223
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: EHD1_ORYSI (Two-component response regulator EHD1 OS=Oryza sativa subsp. indica PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.095e-33 Identity = 74/219 (33.79%), Postives = 123/219 (56.16%), Query Frame = -2 Query: 1 FPAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKR--GSDEIEYASSVNEGTEGTFKAQRKRISAKEED-DGELESDDPSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 648 +P GLRVLV+DDD + ++E +L +C Y VTT A+ + + D+V+SD P DG +L+ + + +P ++M++ G + VM+ + +GA D+L+KP+R EEL NIWQH+ RK+ ++K + G+LE+ H A++ + TE + + + +GE+ D K R+ W+ +LH+QF++AVN LG DKA Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFFPTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIFRKQMQDHKNNNMVGNLEKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEI--TDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKA 223
BLAST of CX308789 vs. ExPASy Swiss-Prot
Match: APRR4_ARATH (Putative two-component response regulator-like APRR4 OS=Arabidopsis thaliana GN=APRR4 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.240e-31 Identity = 84/222 (37.84%), Postives = 128/222 (57.66%), Query Frame = -2 Query: 1 FPAGLRVLVVDDDITVXRILEQMLRRCLYNVTTCSQAAVALNILRERKGCFDVVLSDVHMPDMDGFKLLEHIGLEMDLPVIMMSADGRVSAVMRGIRHGACDYLIKPIREEELKNIWQHVVRKRWNENKEHENSGSLEETDHHKRGSDEIEYASSVNEGTEGTFKAQRKRISAKEEDDGELESDD------PSTTKKPRVVWSVELHQQFVSAVNQLGIDKA 648 FP GLRVLV D+D + ILE+ L++ Y VT C++ A++ LR + FD+ + V+ + D F+ L IG EMDLP+I++S D V +V + + +GA DYLIKPIR E+L+ +++H+V+K + +G E+ K +SSV + T + KR S E + E + D S+ KK RVVW ELHQ F++AV+ LG+++A Sbjct: 38 FPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVNNAEGDIFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFKHLVKKM--RERRSVVTGEAEKAAGEK--------SSSVGDSTIRN-PNKSKRSSCLEAEVNEEDRHDHNDRACASSAKKRRVVWDEELHQNFLNAVDFLGLERA 248 The following BLAST results are available for this feature:
BLAST of CX308789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308789 ID=CX308789; Name=CX308789; organism=Citrus clementina; type=EST; length=655bpback to top |