CX308842
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308842 vs. ExPASy Swiss-Prot
Match: RPB4_MOUSE (DNA-directed RNA polymerase II subunit RPB4 OS=Mus musculus GN=Polr2d PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.360e-12 Identity = 39/100 (39.00%), Postives = 64/100 (64.00%), Query Frame = -2 Query: 4 GKTKPRAFRMSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFEL 303 G + PRA G+ EE+A++L EF A+ L+N EV ++L+H+ +Q + D+ ++S+VF K+L Y RFSR+KN + + VR +L + +L +FEL Sbjct: 4 GGSDPRA----GDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDE--QELSEVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFEL 97
BLAST of CX308842 vs. ExPASy Swiss-Prot
Match: RPB4_HUMAN (DNA-directed RNA polymerase II subunit RPB4 OS=Homo sapiens GN=POLR2D PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.360e-12 Identity = 39/100 (39.00%), Postives = 64/100 (64.00%), Query Frame = -2 Query: 4 GKTKPRAFRMSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFEL 303 G + PRA G+ EE+A++L EF A+ L+N EV ++L+H+ +Q + D+ ++S+VF K+L Y RFSR+KN + + VR +L + +L +FEL Sbjct: 4 GGSDPRA----GDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDE--QELSEVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFEL 97
BLAST of CX308842 vs. ExPASy Swiss-Prot
Match: RPB4_DICDI (DNA-directed RNA polymerase II subunit rpb4 OS=Dictyostelium discoideum GN=polr2d PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.465e-11 Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = -2 Query: 4 TKPRAFRMSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDD-------------PMNQVSQVFEKSLQYVKRFSRYKNPDAVRQVREILSRYQLAEFEL 297 T P R +EEE+ LK + AK L+N EVAI+L+H+ + + +N + + F K+L Y ++FSRYKN +++QVR LS+ L EFE+ Sbjct: 2 TDPLIKRSGIQEEEDLTTLKFPRDLKDAKFLLNSEVAILLEHRKGISESEGTEFPQNTLLIHLYYNSINDIIRTFHKTLAYAEKFSRYKNKTSIKQVRTALSKQNLEEFEI 112 The following BLAST results are available for this feature:
BLAST of CX308842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX308842 ID=CX308842; Name=CX308842; organism=Citrus clementina; type=EST; length=307bpback to top |