CX308874
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX308874 vs. ExPASy Swiss-Prot
Match: SUI1_SALBA (Protein translation factor SUI1 homolog OS=Salix bakko PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.447e-32 Identity = 63/70 (90.00%), Postives = 68/70 (97.14%), Query Frame = -3 Query: 1 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 210 MSEFD IP+AFDPFAEANAEDSGAG+KDYVH+RVQQRNGRKSLTTVQGLKK++SYNKILKDLKKEFCCN Sbjct: 1 MSEFDNAIPTAFDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCN 70
BLAST of CX308874 vs. ExPASy Swiss-Prot
Match: SUI1_BRAOL (Protein translation factor SUI1 homolog OS=Brassica oleracea PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.916e-31 Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = -3 Query: 1 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 210 MSE D+Q+P+AFDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCN Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCN 70
BLAST of CX308874 vs. ExPASy Swiss-Prot
Match: SUI11_ARATH (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana GN=At4g27130 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 4.916e-31 Identity = 61/70 (87.14%), Postives = 68/70 (97.14%), Query Frame = -3 Query: 1 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 210 MSE D+Q+P+AFDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY KILKDLKKEFCCN Sbjct: 1 MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCN 70
BLAST of CX308874 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSJ (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica GN=GOS2 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.187e-30 Identity = 63/72 (87.50%), Postives = 67/72 (93.06%), Query Frame = -3 Query: 1 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 210 MS+ D QIP+AFDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 72
BLAST of CX308874 vs. ExPASy Swiss-Prot
Match: SUI1_ORYSI (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica GN=GOS2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.187e-30 Identity = 63/72 (87.50%), Postives = 67/72 (93.06%), Query Frame = -3 Query: 1 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 210 MS+ D QIP+AFDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 72
BLAST of CX308874 vs. ExPASy Swiss-Prot
Match: SUI12_ARATH (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana GN=At1g54290 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.187e-30 Identity = 59/70 (84.29%), Postives = 68/70 (97.14%), Query Frame = -3 Query: 1 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 210 MS+ + Q+P+AFDPFA+ANAEDSGAG+K+YVHIRVQQRNGRKSLTTVQGLKKE+SY+KILKDLKKEFCCN Sbjct: 1 MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKILKDLKKEFCCN 70
BLAST of CX308874 vs. ExPASy Swiss-Prot
Match: SUI1_SPOST (Protein translation factor SUI1 homolog OS=Sporobolus stapfianus PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.099e-30 Identity = 62/72 (86.11%), Postives = 67/72 (93.06%), Query Frame = -3 Query: 1 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 210 MS+ D QIP+AFDPF+EANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN Sbjct: 1 MSDLDIQIPTAFDPFSEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 72
BLAST of CX308874 vs. ExPASy Swiss-Prot
Match: SUI1_MAIZE (Protein translation factor SUI1 homolog OS=Zea mays GN=TIF PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.211e-29 Identity = 62/72 (86.11%), Postives = 67/72 (93.06%), Query Frame = -3 Query: 1 MSEFDTQIPSAFDPFAEANAEDSGA--GSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 210 MS+ D QIP+AFDPFAEANA DSGA GSKDYVH+R+QQRNGRKSLTTVQGLKKEFSY+KILKDLKKEFCCN Sbjct: 1 MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYSKILKDLKKEFCCN 72
BLAST of CX308874 vs. ExPASy Swiss-Prot
Match: SUI1_PIMBR (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.694e-23 Identity = 50/70 (71.43%), Postives = 58/70 (82.86%), Query Frame = -3 Query: 1 MSEFDTQIPSAFDPFAEANAEDSGAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 210 M + D QIP++FDPFAEA D+ +K+YVHIR+QQRNGRKSLTTVQGLKKE SY+KILKDLKK CCN Sbjct: 1 MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKILKDLKKALCCN 70
BLAST of CX308874 vs. ExPASy Swiss-Prot
Match: EIF1_PONAB (Eukaryotic translation initiation factor 1 OS=Pongo abelii GN=EIF1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.461e-14 Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = -3 Query: 1 AFDPFAEANAEDS--GAGSKDYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCN 180 +FDPFA+A+ D AG++DY+HIR+QQRNGRK+LTTVQG+ ++ K++K KK+F CN Sbjct: 9 SFDPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACN 70 The following BLAST results are available for this feature:
BLAST of CX308874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308874 ID=CX308874; Name=CX308874; organism=Citrus clementina; type=EST; length=374bpback to top |