CX309002
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: ALIS5_ARATH (ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 1.849e-60 Identity = 110/156 (70.51%), Postives = 124/156 (79.49%), Query Frame = -3 Query: 3 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYN 470 QL+NFYQNHRRYVKSRND QL+ + + C PED G+PIVPCGL+AWSLFNDTY+FSRN +QL VNK GI+WKSDR++KFGK VFP NFQ G IGG LN S PLS+QEDLIVWMRTAALPTFRKLYGKIE DL D I V+L+NNYN Sbjct: 126 QLENFYQNHRRYVKSRNDAQLRSPKEEHDVKTCAPEDNV-GGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGISWKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYN 280
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: ALIS4_ARATH (Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 1.198e-59 Identity = 107/156 (68.59%), Postives = 125/156 (80.13%), Query Frame = -3 Query: 3 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYN 470 QL+N+YQNHRRYVKSR D QL+ ET C PEDT G+PIVPCGL+AWSLFNDTY F+RN ++L VNK I+WKSDR+ KFGK VFP NFQ G+LIGG L++ IPLS+QEDLIVWMRTAALPTFRKLYGKI+ DL+ D I V+L+NNYN Sbjct: 129 QLENYYQNHRRYVKSRQDGQLRSPKDEHETKSCAPEDTL-GGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESKFGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGDTIKVLLQNNYN 283
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: ALIS1_ARATH (ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 3.487e-59 Identity = 109/156 (69.87%), Postives = 124/156 (79.49%), Query Frame = -3 Query: 3 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYN 470 QL+NFYQNHRRYVKSR+D QL+ ++ C+PED G+PIVPCGLIAWSLFNDTY SRN + LTVNK GIAWKSD++HKFGK VFP NFQ G L GGA L+ + PLS QEDLIVWMRTAALPTFRKLYGKIE DLE+ + I V L+NNYN Sbjct: 127 QLENFYQNHRRYVKSRSDSQLRSVKDENQIDACKPEDDF-GGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGIAWKSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGKIESDLEKGENIQVTLQNNYN 281
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: ALIS3_ARATH (ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 5.947e-59 Identity = 109/156 (69.87%), Postives = 122/156 (78.21%), Query Frame = -3 Query: 3 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYN 470 QL+NFYQNHRRYVKSR+D QL+ ++ S C+PED G+PIVPCGLIAWSLFNDTY SRN L VNK GIAWKSD++HKFG +VFP NFQ G + GGA L+ IPLS+QEDLIVWMRTAALPTFRKLYGKIE DLE D I V L NNYN Sbjct: 126 QLENFYQNHRRYVKSRSDSQLRSTKYENQISACKPEDDV-GGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGIAWKSDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGKIESDLEMGDTIHVKLNNNYN 280
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: ALIS2_ARATH (Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 2.260e-58 Identity = 106/156 (67.95%), Postives = 128/156 (82.05%), Query Frame = -3 Query: 3 QLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLNESIPLSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNYN 470 QLDN+YQNHRRYVKSR+D+QL + S TS CEPE+++ +G PIVPCGLIAWS+FNDT+TFSR + +L V++N IAWKSDR+HKFGK V+P NFQNGTLIGGA L+ IPLS QED IVWMR AAL +FRKLYG+IE DLE +++V L NNYN Sbjct: 123 QLDNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEESS-NGLPIVPCGLIAWSMFNDTFTFSRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWMRAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYN 277
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: CC50A_CHICK (Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.807e-23 Identity = 73/154 (47.40%), Postives = 88/154 (57.14%), Query Frame = -3 Query: 57 LDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDT---YTFSRNKRQ-LTVNKNGIAWKSDRDHKFGKEVFPSN----FQNGTLIGG----AHLNESIPLSK---QEDLIVWMRTAALPTFRKLYGKIE 467 L NFYQNHRRYVKSR+D QL S + + +CEP T D KPI PCG IA S+FNDT Y + R +T+ K GIAW +D++ KF N FQ T ++ +S P + ED IVWMRTAALPTFRKLY IE Sbjct: 136 LSNFYQNHRRYVKSRDDSQLNGDNSSLLNPSKECEPYRTNED-KPIAPCGAIANSMFNDTLELYHIENDTRTAITLIKKGIAWWTDKNVKFRNPKGDGNLTALFQGTTKPVNWPKPVYMLDSEPDNNGFINEDFIVWMRTAALPTFRKLYRLIE 288
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: CC50A_PONAB (Cell cycle control protein 50A OS=Pongo abelii GN=TMEM30A PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.998e-22 Identity = 68/155 (43.87%), Postives = 84/155 (54.19%), Query Frame = -3 Query: 57 LDNFYQNHRRYVKSRNDEQLKKRSKT--SETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTF-----SRNKRQLTVNKNGIAWKSDRDHKFG--------KEVFPSNFQNGTLIGGAHLNESIPLSK---QEDLIVWMRTAALPTFRKLYGKIE 467 L NFYQNHRRYVKSR+D QL S + + +CEP D KPI PCG IA S+FNDT + + K GIAW +D++ KF KE F + + ++ +S P + ED IVWMRTAALPTFRKLY IE Sbjct: 124 LSNFYQNHRRYVKSRDDSQLNGDSSALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDTLELFLIGNDSYPIPIALKKKGIAWWTDKNVKFRNPPGGDNLKERFKGTTKPVNWLKPVYMLDSDPDNNGFINEDFIVWMRTAALPTFRKLYRLIE 277
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: CC50A_RAT (Cell cycle control protein 50A OS=Rattus norvegicus GN=Tmem30a PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.409e-22 Identity = 69/158 (43.67%), Postives = 85/158 (53.80%), Query Frame = -3 Query: 57 LDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQ-------LTVNKNGIAWKSDRDHKF----GKEVFPSNFQNGTLIGGAHL--------NESIPLSKQEDLIVWMRTAALPTFRKLYGKIE 467 L NFYQNHRRYVKSR+D QL + + + +CEP D KPI PCG IA S+FNDT + + + K GIAW +D++ KF GK+ F++ T H +ES ED IVWMRTAALPTFRKLY IE Sbjct: 88 LSNFYQNHRRYVKSRDDSQLNGDPSALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDTLELFLVANESDPKPVPILLKKKGIAWWTDKNVKFRNPPGKDSLQEKFKDTTKPVNWHKPVYELDPDDESNNGFINEDFIVWMRTAALPTFRKLYRLIE 244
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: CC50A_HUMAN (Cell cycle control protein 50A OS=Homo sapiens GN=TMEM30A PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.452e-22 Identity = 68/155 (43.87%), Postives = 85/155 (54.84%), Query Frame = -3 Query: 57 LDNFYQNHRRYVKSRNDEQLKKRSKT--SETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTF-----SRNKRQLTVNKNGIAWKSDRDHKF----GKEVFPSNFQNGTL----IGGAHLNESIPLSK---QEDLIVWMRTAALPTFRKLYGKIE 467 L NFYQNHRRYVKSR+D QL S + + +CEP D KPI PCG IA S+FNDT + + K GIAW +D++ KF G + F+ T + ++ +S P + ED IVWMRTAALPTFRKLY IE Sbjct: 124 LSNFYQNHRRYVKSRDDSQLNGDSSALLNPSKECEPYRRNED-KPIAPCGAIANSMFNDTLELFLIGNDSYPIPIALKKKGIAWWTDKNVKFRNPPGGDNLEERFKGTTKPVNWLKPVYMLDSDPDNNGFINEDFIVWMRTAALPTFRKLYRLIE 277
BLAST of CX309002 vs. ExPASy Swiss-Prot
Match: CC50A_MOUSE (Cell cycle control protein 50A OS=Mus musculus GN=Tmem30a PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.692e-21 Identity = 68/158 (43.04%), Postives = 84/158 (53.16%), Query Frame = -3 Query: 57 LDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQ-------LTVNKNGIAWKSDRDHKF----GKEVFPSNFQNGTLIGGAHL--------NESIPLSKQEDLIVWMRTAALPTFRKLYGKIE 467 L NFYQNHRRYVKSR+D QL + + + +CEP D +PI PCG IA S+FNDT + + + K GIAW +D++ KF GKE F++ H +ES ED IVWMRTAALPTFRKLY IE Sbjct: 124 LSNFYQNHRRYVKSRDDSQLNGDPSALLNPSKECEPYRRNED-RPIAPCGAIANSMFNDTLELYLVANESDPKPIPIPLKKKGIAWWTDKNVKFRNPPGKESLEEKFKDTIKPVNWHKAVYELDPEDESNNGFINEDFIVWMRTAALPTFRKLYRLIE 280 The following BLAST results are available for this feature:
BLAST of CX309002 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309002 ID=CX309002; Name=CX309002; organism=Citrus clementina; type=EST; length=472bpback to top |