CX309022
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: AB13C_ARATH (ABC transporter C family member 13 OS=Arabidopsis thaliana GN=ABCC13 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 7.753e-32 Identity = 67/97 (69.07%), Postives = 82/97 (84.54%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSS 289 ILVDG NI + P+R+LR AVVPQSPFLF+GSLRDNLDP +++D +IW +L+KC VK VE+V GL+++VKESG SFSVGQRQL+CLARALLKSS Sbjct: 1016 ILVDGKNISHLPIRELRSCLAVVPQSPFLFQGSLRDNLDPLGLSEDWRIWEILDKCKVKAAVESVGGLDSYVKESGCSFSVGQRQLLCLARALLKSS 1112
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: AB10C_ARATH (ABC transporter C family member 10 OS=Arabidopsis thaliana GN=ABCC10 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.715e-21 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = -3 Query: 2 GWTILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 298 G I+VDG++I V DLR RF ++PQ P LF G++R NLDP + D +IW VL KC +KE V+ GL++ V E G ++S+GQRQL CL RA+L+ S Sbjct: 1198 GGKIVVDGVDISKIGVHDLRSRFGIIPQDPTLFNGTVRFNLDPLCQHSDAEIWEVLGKCQLKEVVQEKENGLDSLVVEDGSNWSMGQRQLFCLGRAVLRRS 1298
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: MRP2_MOUSE (Canalicular multispecific organic anion transporter 1 OS=Mus musculus GN=Abcc2 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.213e-20 Identity = 48/101 (47.52%), Postives = 66/101 (65.35%), Query Frame = -3 Query: 2 GWTILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEA--VGLETFVKESGISFSVGQRQLICLARALLKSS 298 G I++DG++I + + DLRGR ++PQ P LF G+LR NLDPF+ D +IW LE H+K V +GL V E G + S+GQRQL+CL RA+L+ S Sbjct: 1353 GGQIIIDGIDIASIGLHDLRGRLTIIPQDPILFSGNLRMNLDPFNKYSDEEIWRALELAHLKSFVAGLQLGLLHEVTEGGDNLSIGQRQLLCLGRAVLRKS 1453
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: AB7C_ARATH (ABC transporter C family member 7 OS=Arabidopsis thaliana GN=ABCC7 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.808e-20 Identity = 45/98 (45.92%), Postives = 68/98 (69.39%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEV--EAVGLETFVKESGISFSVGQRQLICLARALLKSS 289 I +DG+NI+ + DLR R +++PQ P +FEG++R NLDP D +IW L+KC + +E+ + + L++ V E+G ++SVGQRQL+CL R LLK S Sbjct: 1299 IRIDGINILTIGLHDLRSRLSIIPQEPTMFEGTVRSNLDPLEEYADDQIWEALDKCQLGDEIRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRS 1396
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: AB14C_ARATH (ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 6.808e-20 Identity = 45/101 (44.55%), Postives = 68/101 (67.33%), Query Frame = -3 Query: 2 GWTILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEV--EAVGLETFVKESGISFSVGQRQLICLARALLKSS 298 G I++DG++I + DLR RF ++PQ P LFEG++R N+DP D +IW LE+C +K+ V + L++ V ++G ++SVGQRQL+CL R +LK S Sbjct: 1352 GGKIIIDGIDICTLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEKYSDEEIWKSLERCQLKDVVASKPEKLDSLVADNGENWSVGQRQLLCLGRVMLKRS 1452
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: MRP2_HUMAN (Canalicular multispecific organic anion transporter 1 OS=Homo sapiens GN=ABCC2 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.891e-20 Identity = 48/101 (47.52%), Postives = 67/101 (66.34%), Query Frame = -3 Query: 2 GWTILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEA--VGLETFVKESGISFSVGQRQLICLARALLKSS 298 G I++DG++I + + DLR + ++PQ P LF GSLR NLDPF+ D +IW LE H+K V + +GL V E+G + S+GQRQL+CL RALL+ S Sbjct: 1355 GGQIIIDGVDIASIGLHDLREKLTIIPQDPILFSGSLRMNLDPFNNYSDEEIWKALELAHLKSFVASLQLGLSHEVTEAGGNLSIGQRQLLCLGRALLRKS 1455
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: AB6C_ARATH (ABC transporter C family member 6 OS=Arabidopsis thaliana GN=ABCC6 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.891e-20 Identity = 45/98 (45.92%), Postives = 68/98 (69.39%), Query Frame = -3 Query: 2 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEV--EAVGLETFVKESGISFSVGQRQLICLARALLKSS 289 I +DG+NI++ + DLR R +++PQ P +FEG++R NLDP D +IW L+ C + +EV + + L++ V E+G ++SVGQRQL+CL R LLK S Sbjct: 1277 IRIDGINILSIGLHDLRSRLSIIPQDPTMFEGTIRSNLDPLEEYTDDQIWEALDNCQLGDEVRKKELKLDSPVSENGQNWSVGQRQLVCLGRVLLKRS 1374
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: AB4C_ARATH (ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.891e-20 Identity = 45/101 (44.55%), Postives = 68/101 (67.33%), Query Frame = -3 Query: 2 GWTILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEV--EAVGLETFVKESGISFSVGQRQLICLARALLKSS 298 G I++DG++I + DLR RF ++PQ P LFEG++R N+DP D +IW LE+C +K+ V + L++ V ++G ++SVGQRQL+CL R +LK S Sbjct: 1329 GGKIIIDGIDISTLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTEQYSDEEIWKSLERCQLKDVVATKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKRS 1429
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: MRP5_MOUSE (Multidrug resistance-associated protein 5 OS=Mus musculus GN=Abcc5 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.161e-19 Identity = 46/99 (46.46%), Postives = 69/99 (69.70%), Query Frame = -3 Query: 8 GWTILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVE--AVGLETFVKESGISFSVGQRQLICLARALLK 298 G I +DG+ I + + DLR + A++PQ P LF G++R NLDPF+ + +IW LE+ H+KE + + LE+ V E+G +FSVG+RQL+C+ARALL+ Sbjct: 1247 GGCIKIDGIRISDIGLADLRSKLAIIPQEPVLFSGTVRSNLDPFNQYTEDQIWDALERTHMKECIAQLPLKLESEVMENGDNFSVGERQLLCIARALLR 1345
BLAST of CX309022 vs. ExPASy Swiss-Prot
Match: ABCC3_DICDI (ABC transporter C family member 3 OS=Dictyostelium discoideum GN=abcC3 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.517e-19 Identity = 46/96 (47.92%), Postives = 70/96 (72.92%), Query Frame = -3 Query: 8 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLK 289 IL+DG NI ++DLR A++PQ P LF G+LR+N+DPF+ D ++WSVL+ + + +++ GL++ V E+G ++SVGQRQL+CLARALL+ Sbjct: 1120 ILIDGENIAKFGLKDLRRNLAIIPQDPVLFSGTLRENIDPFNEKTDDQLWSVLKDIQLHDVAKSLEGGLDSKVTENGDNWSVGQRQLLCLARALLR 1215 The following BLAST results are available for this feature:
BLAST of CX309022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX309022 ID=CX309022; Name=CX309022; organism=Citrus clementina; type=EST; length=300bpback to top |