CX309072
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.142e-61 Identity = 120/202 (59.41%), Postives = 143/202 (70.79%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQ 607 ANFAVYT LL P DRIMGLD PSGGHL+HGY T KK+SA+SIFFES PY++ G IDY++LEE A+ ++PK++I G S+YPREWDY R R IADK GA LMCDMAH SGL+AA+ L SPFDYCD+VTSTTHK+L K+ +G YD E +INFAV PSLQGGPH N IA +A+ALK+ Sbjct: 107 ANFAVYTALLRPHDRIMGLDLPSGGHLTHGYQTDK-KKISASSIFFESMPYQIGAD-GLIDYQRLEENALLFKPKLIISGASAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDYCDVVTSTTHKTLRGPRSGIIFFRRGKRVD------GNGKEIEEYDIESKINFAVFPSLQGGPHENVIAGVAVALKE 300
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.104e-61 Identity = 118/206 (57.28%), Postives = 146/206 (70.87%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANFA +TGLL P DRIMGLD PSGGHL+HGY T KK+SA SIFFES PY+VN +TGY+DY K+E A +RPK+LI G S+YPREWDY R R+IADK GA L+CDMAHISG++A K+ SPF +CD+VT+TTHK+L K+ +G ++ D E RINFAV PS QGGPH N IA +A+ALK+ ++P Sbjct: 131 ANFAAFTGLLKPHDRIMGLDLPSGGHLTHGYQTDK-KKISATSIFFESMPYQVN-ETGYVDYNKMEANAALFRPKLLIAGASAYPREWDYERMRKIADKHGAYLLCDMAHISGMVAGKQAISPFLFCDVVTTTTHKTLRGPRAGLIFFRKTKRRDAKGNIIDD-------DLENRINFAVFPSCQGGPHENTIAGIAVALKEASSP 327
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 8.856e-56 Identity = 112/207 (54.11%), Postives = 141/207 (68.12%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL-XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 +NF VYT LL P DRIM LD P GGHLSHGY T KK+SA SIFFE+ PY+++ TGYIDY++LE+ A +RPK+++ G S+Y R +DY R R++ DK AVL+ DMAHISGL+AA + SPFDY D+VT+TTHKSL K+ KQG + YD+E++IN AV P LQGGPHN+ I LA+ALKQ TP Sbjct: 153 SNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQGKEV-------FYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTP 351
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYC_CANGA (Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata GN=SHM2 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 8.856e-56 Identity = 119/214 (55.61%), Postives = 140/214 (65.42%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSN--------YDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY L+ P +R+MGL P GGHLSHGY T +K+SA S +FESFPY+VNP+TG IDY+ LE+ A+ YRPKIL+ G S+Y R DY R R+IADKCGA LM DMAHISGL+AA + SPF+Y DIVT+TTHKSL + PR I G N YD E INF+V P QGGPHN+ IAALA ALKQ ATP Sbjct: 114 ANLQVYQALMKPHERLMGLYLPDGGHLSHGYATEN-RKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKILVAGTSAYCRLIDYKRMREIADKCGAYLMVDMAHISGLVAAGVIPSPFEYADIVTTTTHKSL-------------RGPRGAMIFFRRGIRSVNQKTGKEIPYDLENPINFSVFPGHQGGPHNHTIAALATALKQAATP 313
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2) HSP 1 Score: 215.698 bits (548), Expect = 1.511e-55 Identity = 118/214 (55.14%), Postives = 140/214 (65.42%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSN--------YDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 AN VY ++ P +R+MGL P GGHLSHGY T +K+SA S +FESFPY+VNP+TG IDY+ LE+ A+ YRPK+L+ G S+Y R DY R R+IADKCGA LM DMAHISGLIAA + SPF+Y DIVT+TTHKSL + PR I G N YD E INF+V P QGGPHN+ IAALA ALKQ ATP Sbjct: 114 ANLQVYQAIMKPHERLMGLYLPDGGHLSHGYATEN-RKISAVSTYFESFPYRVNPETGIIDYDTLEKNAILYRPKVLVAGTSAYCRLIDYKRMREIADKCGAYLMVDMAHISGLIAAGVIPSPFEYADIVTTTTHKSL-------------RGPRGAMIFFRRGVRSINPKTGKEVLYDLENPINFSVFPGHQGGPHNHTIAALATALKQAATP 313
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYC_CAEBR (Serine hydroxymethyltransferase OS=Caenorhabditis briggsae GN=mel-32 PE=3 SV=3) HSP 1 Score: 214.542 bits (545), Expect = 3.365e-55 Identity = 115/203 (56.65%), Postives = 139/203 (68.47%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSN-YDFEERINFAVHPSLQGGPHNNHIAALAIALKQ 607 ANFAVYT L+ RIMGLD P GGHL+HG+ TP +KVSA S FF+S PYKV+ Q+G IDY+KLEE AM +RPK+LI G S Y R DY RFR+IA K GA LM DMAHISGL+AA + SPF+Y D+VT+TTHKSL ++G+ + G YD EE+IN AV P LQGGPHN+ IA +A+ALKQ Sbjct: 153 ANFAVYTALVGANGRIMGLDLPDGGHLTHGFFTPA-RKVSATSEFFQSMPYKVDAQSGLIDYDKLEENAMLFRPKVLIAGVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGAMIFY-------RKGVRSVNAKGVETLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALKQ 347
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.497e-55 Identity = 110/207 (53.14%), Postives = 141/207 (68.12%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL-XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVATP 619 ANF VYT LL P +RIM LD P GGHLSHGY T KK+SA SIFFE+ PY+++ TGYIDY++LE+ A +RPK+++ G S+Y R +DY R R++ +K A+L+ DMAHISGL+AA + SPFDY D+VT+TTHKSL K+ KQG + YD+E++IN AV P LQGGPHN+ I LA+ALKQ TP Sbjct: 153 ANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCNKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVNKQGKEV-------FYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTP 351
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 9.791e-55 Identity = 111/206 (53.88%), Postives = 139/206 (67.48%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL-XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 ANF VYT LL DRIM LD P GGHLSHGY T KK+SA SIFFE+ PY++N TGYIDY++LE+ A +RPK+++ G S+Y R +DY R R++ DK A+L+ DMAHISGL+AA + SPFDY D+VT+TTHKSL K+ KQG + YD+E++IN AV P LQGGPHN+ I LA+ALKQ T Sbjct: 153 ANFHVYTALLKAHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEVNKQGKEV-------LYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATT 350
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 1.279e-54 Identity = 112/203 (55.17%), Postives = 138/203 (67.98%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSLXXXXXXXXXXXXXKKPRKQGIPLNHGDGCSN-YDFEERINFAVHPSLQGGPHNNHIAALAIALKQ 607 ANFAVYT ++ RIMGLD P GGHL+HG+ TP +KVSA S FF+S PYKV+P TG IDY+KLE+ AM +RPK +I G S Y R DY RFR+IA K GA LM DMAHISGL+AA + SPF+Y D+VT+TTHKSL ++G+ + G YD EE+IN AV P LQGGPHN+ IA +A+AL+Q Sbjct: 149 ANFAVYTAIVGSNGRIMGLDLPDGGHLTHGFFTPA-RKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCYARHLDYERFRKIATKAGAYLMSDMAHISGLVAAGLIPSPFEYSDVVTTTTHKSLRGPRGALIFY-------RKGVRSTNAKGVDTLYDLEEKINSAVFPGLQGGPHNHTIAGIAVALRQ 343
BLAST of CX309072 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.670e-54 Identity = 110/206 (53.40%), Postives = 139/206 (67.48%), Query Frame = 2 Query: 2 ANFAVYTGLLLPGDRIMGLDSPSGGHLSHGYHTPGGKKVSAASIFFESFPYKVNPQTGYIDYEKLEEKAMDYRPKILICGGSSYPREWDYGRFRQIADKCGAVLMCDMAHISGLIAAKELASPFDYCDIVTSTTHKSL-XXXXXXXXXXXXXKKPRKQGIPLNHGDGCSNYDFEERINFAVHPSLQGGPHNNHIAALAIALKQVAT 616 ANF VYT LL DRIM LD P GGHLSHGY T KK+SA SIFFE+ PY++N TGYIDY++LE+ A +RPK+++ G S+Y R +DY R R++ DK A+++ DMAHISGL+AA + SPFDY D+VT+TTHKSL K+ KQG + YD+E++IN AV P LQGGPHN+ I LA+ALKQ T Sbjct: 153 ANFHVYTALLKAHDRIMALDLPHGGHLSHGYQTDT-KKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAIMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEVNKQGKEV-------FYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATT 350 The following BLAST results are available for this feature:
BLAST of CX309072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX309072 ID=CX309072; Name=CX309072; organism=Citrus clementina; type=EST; length=620bpback to top |