CX309102
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX309102 vs. ExPASy Swiss-Prot
Match: CLCF_ARATH (Chloride channel protein CLC-f OS=Arabidopsis thaliana GN=CLC-F PE=2 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 3.205e-48 Identity = 104/181 (57.46%), Postives = 125/181 (69.06%), Query Frame = 2 Query: 2 LTSVLLLFELTRDYRILLPLMGAVGLAIWVPSVANRAKETDASDKRTLARGYSSLSPMEDKNEVLWRRTDGADELELSVVEN-XXXXXXXXXXXXXXXKVSRAMSKEFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVSSICT 541 LTSVLLLFELT+DYRILLPLMGAVGLAIWVPSVAN+ KE+D+S+ R+ RGYSSLSP E K E +WR TD AD LEL+V+EN KV R MSK +VKV+ TL+EA +K+ QNC++VV+ +DFL GILT+GDI+R L S S D NTC VSS+CT Sbjct: 518 LTSVLLLFELTKDYRILLPLMGAVGLAIWVPSVANQGKESDSSEGRSTGRGYSSLSPSERKTEGVWRHTDNADSLELTVIENPDHNSFLDEETILEDLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIMVVDDDDFLAGILTHGDIRRYL-------SNNASTILDENTCPVSSVCT 691
BLAST of CX309102 vs. ExPASy Swiss-Prot
Match: CLCE_ARATH (Chloride channel protein CLC-e OS=Arabidopsis thaliana GN=CLC-E PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.112e-16 Identity = 60/183 (32.79%), Postives = 98/183 (53.55%), Query Frame = 2 Query: 2 LTSVLLLFELTRDYRILLPLMGAVGLAIWVPSVANR---AKETDASDKRTLARGYSSLSPMEDKNEVLWRRTDGADELELSVVENXXXXXXXXXXXXXXXKVSRAMSKEFVKVALTVTLKEAIESMKDGQQNCVLVVNGEDFLEGILTYGDIKRCLSKLSSDNSKGDSIASDVNTCLVSSICT 541 LT+VLLLFELT+DYRI+LPL+GAVG++ W+ S ++ +ET + KR SL+ +D++ T+ E+E S+ + VS AM F V ++ +L+EA+ M +Q+C L+V+ ++ GILT DI+ + S +G++ D+ V+ IC+ Sbjct: 467 LTAVLLLFELTQDYRIVLPLLGAVGMSSWITSGQSKRQETRETKETRKRKSQEAVQSLTSSDDESS-----TNNLCEVESSLCLDDSLNQSEELPKSIF--VSEAMRTRFATVMMSTSLEEALTRMLIEKQSCALIVDPDNIFLGILTLSDIQ----EFSKARKEGNNRPKDI---FVNDICS 635 The following BLAST results are available for this feature:
BLAST of CX309102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX309102 ID=CX309102; Name=CX309102; organism=Citrus clementina; type=EST; length=557bpback to top |