DY257840
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257840 vs. ExPASy Swiss-Prot
Match: TSSC1_DANRE (Protein TSSC1 OS=Danio rerio GN=tssc1 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.496e-40 Identity = 98/293 (33.45%), Postives = 160/293 (54.61%), Query Frame = 2 Query: 35 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGESYG---AAIWQIPELY---------GQLNSPQ-LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 844 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S P D+ + +T ++ T ES AA+W++P + N+PQ LE + LD AH G + CVLW G +++S+ E ++ LW L S+ A I S + G L + + G W PH + +A +++++ WDLRSM + IE+AH VR++D++ K++ L + D+ + WD+R + P++ L H+HW W+V N +D +L+A +DS V L Sbjct: 9 YGLEFQARALTAQTAETDAIRFLVGTQSLKFDNQIHIIDFDDENNMINKSVLLHDAGEIWHISGSPADKAVLTTCYNKTSESRVLTCAAVWRMPPEWESGNHESPDDSSNNPQTLELLCHLDNSAH-GSMACVLWEPMGDGKRVISLAENHVLLWDLQESSAKATISSSATLEGKGQLKF-TAGKWSPHHNCTQLATANDTAIRGWDLRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDVRHISEPVKCLEEHSHWVWSVRYNHSHDQLLLTASSDSRVIL 299 HSP 2 Score: 25.7942 bits (55), Expect = 2.496e-40 Identity = 8/18 (44.44%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 918 SLLNSYSDYEDSVYGLCW 971 S++++Y ++EDSVY + W Sbjct: 338 SIISTYEEHEDSVYAVEW 355
BLAST of DY257840 vs. ExPASy Swiss-Prot
Match: TSSC1_DICDI (Protein tssc1 homolog OS=Dictyostelium discoideum GN=tssc1 PE=1 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 9.937e-40 Identity = 92/297 (30.98%), Postives = 158/297 (53.20%), Query Frame = 2 Query: 35 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG----------------------ESYGAAIWQIPELYGQLNSPQLERIAALDAHVGKINCVLWWSSGRHDKLVSIDEENIFLWS-LDCSNKNAQIQSKQSSGMLHYLSGGAWDPHDVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNLW 847 YGL + R +S + A+ D FL GT +L+EENE+ LL G + C +F HP EI ++SCPFD +F +V++T + +++W+I E + +E + L H G I +L SG ++ ++S+D+ NI LWS +D N+ I+ G L LS G+ +P+ N +A + +++ WD R+ +T S++ AH +R++D++ K + L++A D+ + +WD R + P++ GH HW W+ N +D I+++ +D+TV LW Sbjct: 14 YGLSQKTRALSHITAEADVNRFLVGTTALREENEIALLEAKEG-EGVRCLSIFPHPKEIHSITSCPFDSSLFFSVYNTSGGGNNNSNNTNNNDNTNNNTNNNDFKSSLWRINE-----SMDSIEELFELKGHTGIIKPILCDPSGSNNFIISLDDSNIRLWSKIDDQNEPTVIKQ---FGNLSKLSVGSINPNISNQLATANDVNIKGWDFRNAKETFSMDKAHSEQIRDIDFNPNKPYYLLSAGDDCKLKIWDTRQTRDPVKIFSGHNHWIWSAKFNRYHDQLIITSSSDNTVKLW 301
BLAST of DY257840 vs. ExPASy Swiss-Prot
Match: TSSC1_XENLA (Protein TSSC1 OS=Xenopus laevis GN=tssc1 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.014e-38 Identity = 91/292 (31.16%), Postives = 153/292 (52.40%), Query Frame = 2 Query: 35 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYG----AAIWQIP-ELYG---------QLNSPQLERIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 844 YGL++QAR ++ A+TD FL GT SL+ +N++H++ + L H EIW + + P D+ + +T ++ AA+W+IP EL G N+ LE + LD+ G + CV W G KL+S+ + + +W L S+ + + S + G L + SG W PH + VA +++++ WD+RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L+ +DS V L Sbjct: 9 YGLEFQARALTAQTAETDAIRFLVGTQSLRYDNQIHVIDFDDENNIINKNVLLHHAGEIWQIGASPADRNVLATCYNKISDSKVMTCAAVWRIPKELQGGNHESPDDTSSNAQSLELLCHLDSTAHGNMACVTWEPLGDGKKLLSLADNYLLIWDLQESSTKSVLSSSATLEGKGQLRFTSG-KWSPHHNCTQVATANDTAIRGWDIRSMRQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNIHEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVIL 299 HSP 2 Score: 25.409 bits (54), Expect = 1.014e-38 Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 918 SLLNSYSDYEDSVYGLCW 971 S++ +Y ++EDSVY + W Sbjct: 338 SIIGTYEEHEDSVYAVEW 355
BLAST of DY257840 vs. ExPASy Swiss-Prot
Match: TSSC1_XENTR (Protein TSSC1 OS=Xenopus tropicalis GN=tssc1 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.320e-38 Identity = 94/293 (32.08%), Postives = 155/293 (52.90%), Query Frame = 2 Query: 35 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTGESYG----AAIWQIP-ELYG---------QLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSK---QSSGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 844 YGL++QAR ++ A+TD FL GT SL+ +N++H++ + L H EIW +S+ P D+ + +T ++ AA+W+IP EL G N+ LE + LD AH G + CV W G KL+S+ + + +W L S+ + + S + G L + S G W P H+ VA +++++ WD+RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L+ +DS V L Sbjct: 9 YGLEFQARALAAQTAETDAIRFLVGTQSLRYDNQIHVIDFDDENNIINKNILLHHAGEIWQISASPADRNVLATCYNKISDSKVLTCAAVWRIPKELQGGNHESPDDTSSNAQALELLCHLDNTAH-GNMACVTWEPLGDGKKLLSLADNYLMIWDLQESSTKSVLSSSVTLEGKGQLRFTS-GKWSPHHNCTQVATANDTAIRGWDIRSMRQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNIHEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVIL 299 HSP 2 Score: 24.2534 bits (51), Expect = 1.320e-38 Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 918 SLLNSYSDYEDSVYGLCW 971 S++ +Y ++EDSVY + W Sbjct: 338 SVIATYEEHEDSVYAVEW 355
BLAST of DY257840 vs. ExPASy Swiss-Prot
Match: TSSC1_RAT (Protein TSSC1 OS=Rattus norvegicus GN=Tssc1 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 2.920e-38 Identity = 94/292 (32.19%), Postives = 156/292 (53.42%), Query Frame = 2 Query: 35 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGESYG---AAIWQIPELY--GQLNSPQ--------LERIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 844 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP+ LE + LD G + CV+W G K++S+ + +I LW L S+ A + S + G L + SG W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L+ +DS V L Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADKGVLATCYNKTSDSRVQACAAVWRMPKELESGSHESPEDPASTAQTLELLCHLDNGAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSAALEGRGQLKFTSG-RWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVIL 299 HSP 2 Score: 23.483 bits (49), Expect = 2.920e-38 Identity = 7/18 (38.89%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 918 SLLNSYSDYEDSVYGLCW 971 +++ +Y ++EDSVY + W Sbjct: 337 NVIATYEEHEDSVYAVDW 354
BLAST of DY257840 vs. ExPASy Swiss-Prot
Match: TSSC1_HUMAN (Protein TSSC1 OS=Homo sapiens GN=TSSC1 PE=1 SV=2) HSP 1 Score: 155.992 bits (393), Expect = 8.411e-38 Identity = 97/293 (33.11%), Postives = 156/293 (53.24%), Query Frame = 2 Query: 35 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY--GQLNSPQ--------LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSKQS---SGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 844 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP LE + LD AH G + CV+W G K++S+ + +I LW L S+ A + S S G L + S G W P H+ VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L+ +DS V L Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADRGVLTTCYNRTSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAH-GNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTS-GRWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVLTGSSDSRVIL 299 HSP 2 Score: 23.483 bits (49), Expect = 8.411e-38 Identity = 7/18 (38.89%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 918 SLLNSYSDYEDSVYGLCW 971 +++ +Y ++EDSVY + W Sbjct: 338 NVIATYEEHEDSVYAVDW 355
BLAST of DY257840 vs. ExPASy Swiss-Prot
Match: TSSC1_MOUSE (Protein TSSC1 OS=Mus musculus GN=Tssc1 PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.096e-37 Identity = 93/292 (31.85%), Postives = 155/292 (53.08%), Query Frame = 2 Query: 35 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGESYG---AAIWQIPELY--GQLNSPQ--------LERIAALDAHV-GKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 844 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP LE + LD G + CV+W G K++S+ + +I LW L S+ A + S + G L + + G W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W+V N +D +L+ +DS V L Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADKGVLATCYNKTTDSRVQACAAVWRMPKELESGSHESPDDPASTAQTLELLCHLDNSAQGNVACVVWEPMGDGKKVISLADSHILLWDLQPSSSQAVLASSATLEGRGQLKF-TAGRWSPHHNCTQVATASDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVIL 299 HSP 2 Score: 23.483 bits (49), Expect = 1.096e-37 Identity = 7/18 (38.89%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 918 SLLNSYSDYEDSVYGLCW 971 +++ +Y ++EDSVY + W Sbjct: 337 NVIATYEEHEDSVYAVDW 354
BLAST of DY257840 vs. ExPASy Swiss-Prot
Match: TSSC1_GECJA (Protein TSSC1 OS=Gecko japonicus GN=TSSC1 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.860e-37 Identity = 94/293 (32.08%), Postives = 155/293 (52.90%), Query Frame = 2 Query: 35 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGESYG---AAIWQIPELY----------GQLNSPQLERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSK---QSSGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 844 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T +S T +S AA+W++P+ N+ LE + LD AH G + VLW G KL+S+ + ++ LW L S+ A + + + G L + SG W PH + VA +++++ WD+R+M + IE AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L+A +DS V L Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQVGEIWHISASPADKGVLATCYSKTSDSKVMTCAAVWRMPKELESGSHESPDDSSSNAQTLELLCHLDNTAH-GNMAGVLWEPMGDGKKLISLADNHLLLWDLQESSSKAVLSNSAALEGKGQLKFTSG-RWSPHHNCTQVATANDTAIRGWDIRTMSQIYCIESAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVSDPVKTLEEHSHWVWNVRYNHSHDQLVLTASSDSRVIL 299 HSP 2 Score: 24.6386 bits (52), Expect = 1.860e-37 Identity = 8/18 (44.44%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 918 SLLNSYSDYEDSVYGLCW 971 S++ +Y ++EDSVY + W Sbjct: 338 SIIATYEEHEDSVYAVEW 355
BLAST of DY257840 vs. ExPASy Swiss-Prot
Match: TSSC1_MACFA (Protein TSSC1 OS=Macaca fascicularis GN=TSSC1 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 9.088e-37 Identity = 95/293 (32.42%), Postives = 155/293 (52.90%), Query Frame = 2 Query: 35 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFS-TGES---YGAAIWQIPELY--GQLNSPQ--------LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSKQS---SGMLHYLSGGAWDP-HDVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 844 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ T +S AA+W++P+ G SP LE + LD AH + CV+W G K++S+ + +I LW L S+ A + S S G L + S G W P H+ VA +++++ WD R+M + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L+ +DS V L Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPADRGVLATCYNRTSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAH-SNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLGGKGQLKFTS-GRWSPHHNCTQVATANDTTLRGWDTRTMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVLTGSSDSRVIL 299 HSP 2 Score: 23.483 bits (49), Expect = 9.088e-37 Identity = 7/18 (38.89%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 918 SLLNSYSDYEDSVYGLCW 971 +++ +Y ++EDSVY + W Sbjct: 338 NVIATYEEHEDSVYAVDW 355
BLAST of DY257840 vs. ExPASy Swiss-Prot
Match: TSSC1_PONAB (Protein TSSC1 OS=Pongo abelii GN=TSSC1 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 2.823e-35 Identity = 97/320 (30.31%), Postives = 157/320 (49.06%), Query Frame = 2 Query: 35 YGLKYQARCISDVKADTDHTSFLTGTLSLKEENEVHLLRLSSGGTELICEGLFSHPNEIWDLSSCPFDQRIFSTVFSTG-------ESYGA------------------------AIWQIPELY--GQLNSPQ--------LERIAALD--AHVGKINCVLWWSSGRHDKLVSIDEENIFLWSLDCSNKNAQIQSKQS---SGMLHYLSGGAWDPH-DVNAVAATCESSVQFWDLRSMVKTNSIEHAH---VRNVDYDTKKKHLLVTAADESGIHLWDLRMLKAPIQELPGHTHWTWAVCCNPEYDGFILSAGTDSTVNL 844 YGL++QAR ++ A+TD FL GT SLK +N++H++ + L EIW +S+ P D+ + +T ++ +S+GA A+W++P+ G SP LE + LD AH G + CV+W G K++S+ + +I LW L S+ A + S S G L + SG W PH + VA +++++ WD RSM + IE+AH VR++D++ K++ L + D+ + WD R + P++ L H+HW W V N +D +L+ +DS V L Sbjct: 9 YGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQVGEIWHISASPADRGVLATCYNRTFCCVLSLDSFGALGKSSAQLFIALATSSDSKVLTCAAVWRMPKELESGSHESPDDSSSTAQTLELLCHLDNTAH-GNMACVVWEPMGDGKKIISLADNHILLWDLQESSSQAVLASSASLEGKGQLKFTSG-RWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVKTLEEHSHWVWNVRYNHSHDQLVLTGSSDSRVIL 326 HSP 2 Score: 23.483 bits (49), Expect = 2.823e-35 Identity = 7/18 (38.89%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 918 SLLNSYSDYEDSVYGLCW 971 +++ +Y ++EDSVY + W Sbjct: 365 NVIATYEEHEDSVYAVDW 382 The following BLAST results are available for this feature:
BLAST of DY257840 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257840 ID=DY257840; Name=DY257840; organism=Citrus clementina; type=EST; length=1311bpback to top |