DY257917
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY257917 vs. ExPASy Swiss-Prot
Match: RGLG2_ARATH (E3 ubiquitin-protein ligase RGLG2 OS=Arabidopsis thaliana GN=RGLG2 PE=1 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 1.403e-20 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 750 GPTSYAPMVEAAVDIVEESGGPAHVLVIITSGQVATG--------SQQEQETIRSIVDASSYPLSIGL 929 GPTS+AP+++ A+ IVE+SGG HVLVII GQV S QEQ+T+ +IV AS PLSI L Sbjct: 222 GPTSFAPIIDMAMTIVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVL 289 HSP 2 Score: 55.0694 bits (131), Expect = 1.403e-20 Identity = 24/47 (51.06%), Postives = 31/47 (65.96%), Query Frame = 1 Query: 922 LVFVGVGDGPWGSIQKFHDKIPALQFDNFHLVNFTGLRSKTTTTAEK 1062 +V VGVGDGPW +++F D IPA FDNF VNFT + +K + K Sbjct: 287 IVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMAKNKAQSLK 333 HSP 3 Score: 98.2117 bits (243), Expect = 9.620e-20 Identity = 52/102 (50.98%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 242 LIFGIDFTASNLWAGKFSFENESLHTIVDGDTLNPYQEVIYITGKELVLFDGD-CIRCYGFGDDTTRDEGVFSFQENDSPCQGFEHVLECYRKNVPNVQYFG 544 LI GIDFT SN W G SF +SLH I G + NPY++ I I G+ L FD D I CYGFGD +T D+ VFSF D C GFE VL Y++ VP ++ G Sbjct: 123 LIVGIDFTKSNEWTGARSFNRKSLHFI--GSSPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFNSEDRFCNGFEEVLSRYKEIVPQLKLAG 222
BLAST of DY257917 vs. ExPASy Swiss-Prot
Match: RGLG1_ARATH (E3 ubiquitin-protein ligase RGLG1 OS=Arabidopsis thaliana GN=RGLG1 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.389e-18 Identity = 51/102 (50.00%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 242 LIFGIDFTASNLWAGKFSFENESLHTIVDGDTLNPYQEVIYITGKELVLFDGD-CIRCYGFGDDTTRDEGVFSFQENDSPCQGFEHVLECYRKNVPNVQYFG 544 LI GIDFT SN W G SF +SLH + +T NPY++ I I G+ L FD D I CYGFGD +T D+ VFSF C GFE VL YR+ VP ++ G Sbjct: 157 LIVGIDFTKSNEWTGAKSFNRKSLHHL--SNTPNPYEQAITIIGRTLAAFDEDNLIPCYGFGDASTHDQDVFSFYPEGRFCNGFEEVLARYREIVPQLKLAG 256
BLAST of DY257917 vs. ExPASy Swiss-Prot
Match: CPNA2_CAEEL (Copine domain-containing protein 2 OS=Caenorhabditis elegans GN=cpna-2 PE=2 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 4.469e-17 Identity = 48/105 (45.71%), Postives = 62/105 (59.05%), Query Frame = 2 Query: 242 LIFGIDFTASNLWAGKFSFENESLHTIVDGDTLNPYQEVIYITGKELVLFDGD-CIRCYGFGDDTTRDEGVFSFQEN---DSPCQGFEHVLECYRKNVPNVQYFG 544 LIFGID+T SN + G+ +F+ LHTI D +NPYQ+VI I GK L FD D I YGFGD+ D G+F+ E + C GFE VL Y + P ++ G Sbjct: 7319 LIFGIDYTKSNFYQGERTFDKRPLHTI-DPAEMNPYQQVIQIVGKTLSSFDADGQIPAYGFGDEEFTDHGIFNIAERYDLEKDCNGFEEVLRVYNEVTPTIEMSG 7422 HSP 2 Score: 50.447 bits (119), Expect = 7.282e-13 Identity = 20/39 (51.28%), Postives = 25/39 (64.10%), Query Frame = 1 Query: 907 HIHFRLVFVGVGDGPWGSIQKFHDKIPALQFDNFHLVNF 1023 H ++ VGVGDGPW + +F D IP FDNFH V+F Sbjct: 7469 HYPLSIIMVGVGDGPWNMMGRFDDNIPKRLFDNFHFVDF 7507 HSP 3 Score: 43.5134 bits (101), Expect = 7.282e-13 Identity = 23/58 (39.66%), Postives = 36/58 (62.07%), Query Frame = 3 Query: 750 GPTSYAPMVEAAVDIVEESGGPAHVLVIITSGQVATGSQQEQETIRSIVDASSYPLSI 923 GPT++ P+++ A++I +E H+LVI+ GQV E+ ++I AS YPLSI Sbjct: 7422 GPTNFVPLIDRAIEICKEKHS-YHILVIVADGQVT----NEKINQKAIAAASHYPLSI 7474 The following BLAST results are available for this feature:
BLAST of DY257917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY257917 ID=DY257917; Name=DY257917; organism=Citrus clementina; type=EST; length=1153bpback to top |