DY258203
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY258203 vs. ExPASy Swiss-Prot
Match: DME_ARATH (Transcriptional activator DEMETER OS=Arabidopsis thaliana GN=DME PE=1 SV=2) HSP 1 Score: 288.115 bits (736), Expect = 7.024e-77 Identity = 160/338 (47.34%), Postives = 203/338 (60.06%), Query Frame = 3 Query: 3 GECKHFASAVASARFALPGPSEKGIVTSEFGNGIGQSPPLVVNPIPV-IRIEADPVSESGYQINNCEPIIEEPRSPGPQCXXXXXXXXXXXXXXXXXXXXXPTLRLQEREFKENFPNFMEMNKVMLQD--SSALVALTAEAASVPTRKLKRCAHLRTEHHVYVLPDAHELLRGFDRRDPDDPSPYLLAIWSPGEPPNSVGSPQYRCNSKDS-KLCNSEICYSCNSVCERNAGIVRGTILIPCRTANRGRFPLNGTYFQVNEVFADHETSHHPINVPRHTIANLRREIVWLWKFSNNIV*CFRHAADSGI--LFGEGFVCVRGFDRRYRCPKPLVNRLH 998 GEC+HFASA ASAR ALP P E+ + ++ PP+ + I + + +E S + NCEPIIEEP SPG +C PT++L +F ME N + + S ALVAL S+PT KLK + LRTEH VY LPD+H LL G D+R+PDDPSPYLLAIW+PGE NS P+ +C K S K+C E C CNS+ E N+ VRGT+LIPCRTA RG FPLNGTYFQVNE+FADHE+S PI+VPR I +L R V+ F ++ FR + I F +GFVCVRGF+++ R P+PL+ RLH Sbjct: 1643 GECRHFASAYASARLALPAPEERSLTSATIPVPPESYPPVAIPMIELPLPLEKSLASGAPSNRENCEPIIEEPASPGQECTEITESDIEDAYYNEDPDEI-PTIKLNIEQFGMTLREHMERNMELQEGDMSKALVALHPTTTSIPTPKLKNISRLRTEHQVYELPDSHRLLDGMDKREPDDPSPYLLAIWTPGETANSAQPPEQKCGGKASGKMCFDETCSECNSLREANSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNELFADHESSLKPIDVPRDWIWDLPRRTVY---FGTSVTSIFRGLSTEQIQFCFWKGFVCVRGFEQKTRAPRPLMARLH 1976
BLAST of DY258203 vs. ExPASy Swiss-Prot
Match: ROS1_ARATH (Protein ROS1 OS=Arabidopsis thaliana GN=ROS1 PE=1 SV=2) HSP 1 Score: 278.87 bits (712), Expect = 4.262e-74 Identity = 172/352 (48.86%), Postives = 209/352 (59.38%), Query Frame = 3 Query: 3 GECKHFASAVASARFALPGPSEKGIVTSEFGNGIGQSPPLVVNPIPVIRIEADPV---SESGYQINNCEPIIEEPRSPGPQCXXXXXXXXXXXXXXXXXXXXXPTLRLQEREFKENFPNFMEMNKVMLQD---SSALVALTAEAASVPTRKLKRCAHLRTEHHVYVLPDAHELLRGFDRRDPDDPSPYLLAIWSPGEPPNSVGSPQYRCNSK-DSKLCNSEICYSCNSVCERNAGIVRGTILIPCRTANRGRFPLNGTYFQVNEVFADHETSHHPINVPRHTIANLRREIVWLWKFSNNIV*CFRHAADSGI--LFGEGFVCVRGFDRRYRCPKPLVNRLHCSPVKKEAGSQ 1031 GEC+HFASA ASAR ALP +EKG+ T + ++P + P P R + V SE ++ CEPIIEEP SP P+ PT+RL F N ME NK LQD SSALVALTAE AS+P KLK + LRTEH VY LPD H LL ++R+PDDP YLLAIW+PGE +S+ C + + LC+ E C+SCNS+ E + IVRGTILIPCRTA RG FPLNGTYFQVNEVFADH +S +PINVPR I L R V+ F ++ F+ + I F +G+VCVRGFDR+ R PKPL+ RLH P K G Q Sbjct: 1052 GECRHFASAFASARLALPS-TEKGMGTPD------KNPLPLHLPEPFQREQGSEVVQHSEPAKKVTCCEPIIEEPASPEPETAEVSIADIEEAFFEDPEEI--PTIRLNMDAFTSNLKKIMEHNKE-LQDGNMSSALVALTAETASLPMPKLKNISQLRTEHRVYELPDEHPLLAQLEKREPDDPCSYLLAIWTPGETADSIQPSVSTCIFQANGMLCDEETCFSCNSIKETRSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHASSLNPINVPRELIWELPRRTVY---FGTSVPTIFKGLSTEKIQACFWKGYVCVRGFDRKTRGPKPLIARLH-FPASKLKGQQ 1389
BLAST of DY258203 vs. ExPASy Swiss-Prot
Match: DML3_ARATH (DEMETER-like protein 3 OS=Arabidopsis thaliana GN=DML3 PE=2 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 1.166e-55 Identity = 138/342 (40.35%), Postives = 178/342 (52.05%), Query Frame = 3 Query: 6 ECKHFASAVASARFALPGPSEKGIVTSEFGNGIGQSPPLVVNPIPVIRIEADPVSESGYQINNC-EPIIEEPRSPGPQCXXXXXXXXXXXXXXXXXXXXXPTLRLQEREFKENFPNFMEMNKVMLQD----SSALVALTAEAASVPT---RKLKRCAHLRTEHHVYVLPDAHELLRGFDRRDPDDPSPYLLAIWSPGEPPNSVGSPQYRCNSKDSKLCNSEICYSCNSVCERNAGIVRGTILIPCRTANRGRFPLNGTYFQVNEVFADHETSHHPINVPRHTIANLRREIVWLWKFSNNIV*CFRHAADSGILFGEGFVCVRGFDRRYRCPKPLVNRLHCSP 1007 ECK+FASA S++ L P EK + F N Q + V+ I + + VS C +P++E P SP + P + K++ + + ++ M S ALV T E A +P RK+K LRTEH VYVLPD HELL F+RR DDPSPYLLAIW PGE +S P+ +C+S SKLC + C C ++ E+N+ I RGTILIPCRTA RG FPLNGTYFQ NEVFADHETS +PI R L + ++ +I + F GF+C+R FDR+ R PK LV RLH P Sbjct: 693 ECKYFASAYVSSKVLLESPEEKMHEPNTFMNAHSQD--VAVDMTSNINLVEECVSSGCSDQAICYKPLVEFPSSPRAEIPESTDIEDVPFMNLYQSYASVPKIDFDLDALKKSVEDALVISGRMSSSDEEISKALVIPTPENACIPIKPPRKMKYYNRLRTEHVVYVLPDNHELLHDFERRKLDDPSPYLLAIWQPGETSSSFVPPKKKCSSDGSKLCKIKNCSYCWTIREQNSNIFRGTILIPCRTAMRGAFPLNGTYFQTNEVFADHETSLNPIVFRRELCKGLEKRALYCGSTVTSIF-KLLDTRRIELCFWTGFLCLRAFDRKQRDPKELVRRLHTPP 1031
BLAST of DY258203 vs. ExPASy Swiss-Prot
Match: DML2_ARATH (DEMETER-like protein 2 OS=Arabidopsis thaliana GN=DML2 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.989e-55 Identity = 127/294 (43.20%), Postives = 167/294 (56.80%), Query Frame = 3 Query: 6 ECKHFASAVASARFALPGPSEKGIVTSEFGNGIGQSPPLVVNPIPVIRIEADPVSESGYQINNCEPIIEEPRSPGPQCXXXXXXXXXXXXXXXXXXXXX-------PTLRLQEREFKENFPNFMEMNKVMLQDSSALVALTAEAASVPTRKLKRCAHLRTEHHVYVLPDAHELLRGFDRRDPDDPSPYLLAIWSPGEPPNSVGSPQYRCNSKDSK--LCNSEICYSCNSVCERNAGIVRGTILIPCRTANRGRFPLNGTYFQVNEVFADHETSHHPINVPRHTIANLRREIVWL 860 EC+H++SA ASAR ALP P E + + P+VVN P + + + E+ + NCEPIIEEP SP P+ PT+ L + + + + +NK S LV L+ AA++P RKLK LRTEHHV+ LPD H +L GF+RR+ +D PYLLAIW+PGE NS+ P+ RC +S LCN C+ CN E + VRGTILIPCRTA RG FPLNGTYFQ NEVFADH++S +PI+VP I +L+R + +L Sbjct: 962 ECRHYSSARASARLALPEPEESDRTSVMIHERRSKRKPVVVNFRPSLFLYQEKEQEA-QRSQNCEPIIEEPASPEPEYIEHDIEDYPRDKNNVGTSEDPWENKDVIPTIILNK---EAGTSHDLVVNKEA-GTSHDLVVLSTYAAAIPRRKLKIKEKLRTEHHVFELPDHHSILEGFERREAEDIVPYLLAIWTPGETVNSIQPPKQRCALFESNNTLCNENKCFQCNKTREEESQTVRGTILIPCRTAMRGGFPLNGTYFQTNEVFADHDSSINPIDVPTELIWDLKRRVAYL 1250 The following BLAST results are available for this feature:
BLAST of DY258203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY258203 ID=DY258203; Name=DY258203; organism=Citrus clementina; type=EST; length=1213bpback to top |