DY258382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDA19_ARATH (Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2) HSP 1 Score: 323.939 bits (829), Expect = 6.454e-88 Identity = 150/197 (76.14%), Postives = 176/197 (89.34%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDDERKSLPNRVKREAVEPEQKDREGLKGMAEQARGFDMIADDSISTKVLDMSSMPIDEPSIKVEQENMSK 591 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEV+DKMP+HEYYEYFGPDYTLHVAPSNMENKNSRQ+LEEIRN LL LSKLQHAPSV FQERPPD+E PE DEDQEDGD+RWDPDSDMDVDD+RK +P+RVKREAVEP+ KD++GLKG+ E+ +G ++ D+S STKV ++ + ++E S+K+E+E +K Sbjct: 294 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHVAPSNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPDTETPEVDEDQEDGDKRWDPDSDMDVDDDRKPIPSRVKREAVEPDTKDKDGLKGIMERGKGCEVEVDESGSTKVTGVNPVGVEEASVKMEEEGTNK 490
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDA19_MAIZE (Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 7.186e-63 Identity = 129/209 (61.72%), Postives = 158/209 (75.60%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDPDSDMDVDD--------ERKSLPNRVKREAVEPEQKDREGLKGMAEQARGFDMIADDSISTK---VLDMSSMPIDEPS-IKVEQENMSK 591 ++MRSFNVPLLLLGGGGYTIRNVARCWCYETGVALG E +DKMP +EYYEYFGPDYTLHVAPSNMENKN+RQ L++IR+K LSKL+HAPSV FQER PD+E+PE DEDQ+D DER DPDSDM+VDD R L ++KRE E + ++G + +A + RG + +A+D S+K D S+M IDEPS +K E E+ +K Sbjct: 299 RYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDYTLHVAPSNMENKNTRQQLDDIRSK----LSKLRHAPSVHFQERVPDTEIPEQDEDQDDPDERHDPDSDMEVDDHKAVEESSRRSILGIKIKREFGENATRVQDGGR-VASEHRGLEPMAEDIGSSKQAPQADASAMAIDEPSNVKNEPESSTK 502
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDA6_ARATH (Histone deacetylase 6 OS=Arabidopsis thaliana GN=HDA6 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.249e-40 Identity = 83/139 (59.71%), Postives = 103/139 (74.10%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEADEDQEDGDERWDP---------DSDMDVDDE 390 +F+RS+NVPL++LGGGGYTIRNVARCWCYET VA+GVE D+K+P +EY+EYFGPDYTLHV PS MEN N+ + +E IRN LLE LS L HAPSVQFQ PP + + DE ++D + R P +SD D DD+ Sbjct: 298 RFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPSPMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRV--LDEPEDDMETRPKPRIWSGTATYESDSDDDDK 434
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC1_RAT (Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.782e-37 Identity = 82/180 (45.56%), Postives = 117/180 (65.00%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDERWD--------------PDSDMDVDDERKSLPNRVKREAVEPE---QKDREGLKGMAEQAR 483 +F++SFN+P+L+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+ +L E L L HAP VQ Q P D+ +PE DED+ED D+R DSD + + RK+ N K + V+ E +KD E K + E+ + Sbjct: 286 EFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEK 464
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC1_MOUSE (Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.782e-37 Identity = 82/180 (45.56%), Postives = 117/180 (65.00%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDERWD--------------PDSDMDVDDERKSLPNRVKREAVEPE---QKDREGLKGMAEQAR 483 +F++SFN+P+L+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+ +L E L L HAP VQ Q P D+ +PE DED+ED D+R DSD + + RK+ N K + V+ E +KD E K + E+ + Sbjct: 286 EFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEK 464
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC1_BOVIN (Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.782e-37 Identity = 82/180 (45.56%), Postives = 117/180 (65.00%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDERWD--------------PDSDMDVDDERKSLPNRVKREAVEPE---QKDREGLKGMAEQAR 483 +F++SFN+P+L+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+ +L E L L HAP VQ Q P D+ +PE DED+ED D+R DSD + + RK+ N K + V+ E +KD E K + E+ + Sbjct: 286 EFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEK 464
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC1_PONAB (Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.155e-36 Identity = 80/180 (44.44%), Postives = 117/180 (65.00%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDERWD--------------PDSDMDVDDERKSLPNRVKREAVEPE---QKDREGLKGMAEQAR 483 +F++SFN+P+L+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+ +L E L L HAP VQ Q P D+ +PE DED++D D+R DS+ + + RK+ N K + V+ E +KD E K + E+ + Sbjct: 286 EFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEDDPDKRISICSSDKRIACEEEFSDSEEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEK 464
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC1_HUMAN (Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.155e-36 Identity = 80/180 (44.44%), Postives = 117/180 (65.00%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPE--ADEDQEDGDERWD--------------PDSDMDVDDERKSLPNRVKREAVEPE---QKDREGLKGMAEQAR 483 +F++SFN+P+L+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+ +L E L L HAP VQ Q P D+ +PE DED++D D+R DS+ + + RK+ N K + V+ E +KD E K + E+ + Sbjct: 286 EFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEDDPDKRISICSSDKRIACEEEFSDSEEEGEGGRKNSSNFKKAKRVKTEDEKEKDPEEKKEVTEEEK 464
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDA1B_XENLA (Probable histone deacetylase 1-B OS=Xenopus laevis GN=hdac1-B PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.155e-36 Identity = 81/185 (43.78%), Postives = 120/185 (64.86%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDSELPEA-DEDQEDGDERWD--------------PDSDMDVDDERKSLPN--RVKREAVEPEQKDREGLKGMAEQARGFDMIAD 504 +F+++FN+P+L+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+ +L E L L HAP VQ Q P DS ++ +ED+ED D+R DS+ + + RK++ N +VKR E E+K+ E K + E+ + D D Sbjct: 286 EFIKTFNLPMLMLGGGGYTIRNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDSVHDDSGEEDEEDPDKRISIRSSDKRIACDEEFSDSEDEGEGGRKNVANFKKVKRVKTE-EEKEGEDKKDVKEEEKAKDEKTD 469
BLAST of DY258382 vs. ExPASy Swiss-Prot
Match: HDAC1_CHICK (Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.277e-35 Identity = 73/166 (43.98%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 1 KFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVDDKMPQHEYYEYFGPDYTLHVAPSNMENKNSRQLLEEIRNKLLEYLSKLQHAPSVQFQERPPDS-ELPEADEDQEDGDERWD--------------PDSDMDVDDERKSLPNRVKREAVEPEQKDRE 453 +F++SFN+P+L+LGGGGYTIRNVARCW YET VAL E+ +++P ++Y+EYFGPD+ LH++PSNM N+N+ + LE+I+ +L E L L HAP VQ Q P D+ + DE++ED ++R DS+ + + RK++ N K + V+ E++ E Sbjct: 286 EFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSEDEGEGGRKNVANFKKAKRVKTEEEKEE 451 The following BLAST results are available for this feature:
BLAST of DY258382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258382 ID=DY258382; Name=DY258382; organism=Citrus clementina; type=EST; length=815bpback to top |