DY258681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPDE_SOLLC (Spermidine synthase OS=Solanum lycopersicum GN=SPDSYN PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 4.838e-71 Identity = 131/175 (74.86%), Postives = 146/175 (83.43%), Query Frame = 3 Query: 141 TDLPLKRPRDD-GEKE---ANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 T+LP+KRPR++ E E ANN+NNG + + ISSV+PGWFSEISP+WPGEAHSLKVEKILFQGKSDYQNV+VFQSSTYGKVL+LDGVIQLTERDECAYQEMITHLPLCSIPNPK VLVIGGGDG VLRE+SRHSSVE+ DI EIDKM +V KQFFPDV +DP Sbjct: 12 TELPVKRPREEEAETEMEAANNSNNGC-----EKEESSPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVLVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVEVAKQFFPDVAVGYEDP 181 HSP 2 Score: 33.113 bits (74), Expect = 4.838e-71 Identity = 24/57 (42.11%), Postives = 30/57 (52.63%), Query Frame = 1 Query: 637 VG*KIPRVTLHIGDGFAFVKAGRETPVNVLNLEI--PYD*MVPRQKILIHHPFFTSL 801 VG + PRV LHIGDG AF+K P + I D + P Q+ L PFF S+ Sbjct: 176 VGYEDPRVNLHIGDGVAFLK---NVPAGTYDAVIVDSSDPIGPAQE-LFEKPFFESI 228
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPD2_ARATH (Spermidine synthase 2 OS=Arabidopsis thaliana GN=SPDSYN2 PE=1 SV=2) HSP 1 Score: 258.455 bits (659), Expect = 1.400e-70 Identity = 131/184 (71.20%), Postives = 150/184 (81.52%), Query Frame = 3 Query: 114 MAETGSAAATDLPLKRPRDDGEKEANNNNNGSVLMEMDSN----KQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 M+ T A+ TDLP+KRPR EA +NNG ME ++ K+P C+SS+IPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQ+V+VFQS+TYGKVL+LDGVIQLTERDECAYQEMITHLPLCSI NPK VLVIGGGDG VLRE++RHSSVE+ DI EIDKM V KQ+FP+V +DP Sbjct: 1 MSSTQEASVTDLPVKRPR-----EAEEDNNGGA-METENGGGEIKEPSCMSSIIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSISNPKKVLVIGGGDGGVLREVARHSSVEQIDICEIDKMVVDVAKQYFPNVAVGYEDP 178 HSP 2 Score: 29.6462 bits (65), Expect = 1.400e-70 Identity = 22/55 (40.00%), Postives = 30/55 (54.55%), Query Frame = 1 Query: 637 VG*KIPRVTLHIGDGFAFVKAGRETPVNVLNLEIPYD*MVPRQKILIHHPFFTSL 801 VG + PRV L IGDG AF+K E + + ++ D + P K L PFF S+ Sbjct: 173 VGYEDPRVNLIIGDGVAFLKNAAEGTYDAVIVD-SSDPIGP-AKELFEKPFFESV 225
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPD1_PEA (Spermidine synthase 1 OS=Pisum sativum GN=SPDSYN1 PE=2 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 2.597e-69 Identity = 126/172 (73.26%), Postives = 140/172 (81.40%), Query Frame = 3 Query: 138 ATDLPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 +TD PLKR R+D E N ++ + QP+ +SSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQ+VMVFQS+TYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPK VLVIGGGDG VLRE++RHSSVEK DI EIDKM V K++FPD+ DP Sbjct: 10 STDSPLKRQRED---EVNGVSD-----TLSKEPQPNGLSSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVMVFQSATYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHSSVEKIDICEIDKMVVDVSKEYFPDIAVGFADP 173 HSP 2 Score: 35.8094 bits (81), Expect = 2.597e-69 Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 637 VG*KIPRVTLHIGDGFAFVKAGRETPVNVLNLEIPYD*MVPRQKILIHHPFFTSL 801 VG PRVTL+IGDG AF+KA E + + ++ D + P Q+ L PFF S+ Sbjct: 168 VGFADPRVTLNIGDGVAFLKAAPEGTYDAVIVD-SSDPIGPAQE-LFEKPFFESV 220
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPD2_DATST (Spermidine synthase 2 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 5.762e-69 Identity = 123/155 (79.35%), Postives = 135/155 (87.10%), Query Frame = 3 Query: 189 NNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 NNNNNG ++K+ CISSV+PGWFSEISP+WPGEAHSLKVEKILFQGKSDYQ+VMVFQS+TYGKVL+LDGVIQLTERDECAYQEMITHLPLCSIPNPK VLVIGGGDG VLRE+SRHSSVE+ DI EIDKM +V KQFFPDV +DP Sbjct: 7 NNNNNGCT-----NDKESPCISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQDVMVFQSTTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVEVAKQFFPDVAVGYEDP 156 HSP 2 Score: 31.9574 bits (71), Expect = 5.762e-69 Identity = 23/57 (40.35%), Postives = 30/57 (52.63%), Query Frame = 1 Query: 637 VG*KIPRVTLHIGDGFAFVKAGRETPVNVLNLEI--PYD*MVPRQKILIHHPFFTSL 801 VG + PRV LHIGDG AF+K P + I D + P Q+ L PFF ++ Sbjct: 151 VGYEDPRVNLHIGDGVAFLK---NVPAGTYDAVIVDSSDPIGPAQE-LFEKPFFETI 203
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPD2_PEA (Spermidine synthase 2 OS=Pisum sativum GN=SPDSYN2 PE=2 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.393e-67 Identity = 124/178 (69.66%), Postives = 143/178 (80.34%), Query Frame = 3 Query: 129 SAAATDLPLKRPRDDGEKEANNNNNGSVLMEMDS-NKQP--DCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 S + +K RDD EK +N + +V M+++ +K P + +SSVIPGWFSEISPMWPGEAHSLK+EKILFQGKS+YQ VMVFQSSTYGKVL+LDGVIQLTERDECAYQEMITHLPLCSIPNPK VLVIGGGDG VLRE++RHSS+EK DI EID M +V KQFFP+V DP Sbjct: 5 STVELESSMKEHRDDDEK-SNGFSVSAVSMDVEGGDKDPSGNGVSSVIPGWFSEISPMWPGEAHSLKIEKILFQGKSEYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHSSIEKIDICEIDNMVVEVSKQFFPEVAVGFNDP 181 HSP 2 Score: 35.8094 bits (81), Expect = 1.393e-67 Identity = 24/55 (43.64%), Postives = 32/55 (58.18%), Query Frame = 1 Query: 637 VG*KIPRVTLHIGDGFAFVKAGRETPVNVLNLEIPYD*MVPRQKILIHHPFFTSL 801 VG PRVTL IGDG AF+KA E + + ++ D + P Q+ L PFF S+ Sbjct: 176 VGFNDPRVTLRIGDGVAFLKAAPEGTYDAVIVD-SSDPIGPAQE-LFEKPFFQSV 228
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPD1_ARATH (Spermidine synthase 1 OS=Arabidopsis thaliana GN=SPDSYN1 PE=1 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 1.817e-67 Identity = 124/176 (70.45%), Postives = 145/176 (82.39%), Query Frame = 3 Query: 135 AATDLPLKRPRDDGEKEANNNNNGSVLMEM---DSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 +ATDL KRPR++ ++N G+ ME D K+P C S+VIPGWFSE+SPMWPGEAHSLKVEK+LFQGKSDYQ+V+VFQS+TYGKVL+LDGVIQLTERDECAYQEMITHLPLCSIPNPK VLVIGGGDG VLRE++RH+S+E+ D+ EIDKM V KQFFPDV +DP Sbjct: 7 SATDL--KRPREE------DDNGGAATMETENGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDP 174 HSP 2 Score: 29.261 bits (64), Expect = 1.817e-67 Identity = 21/55 (38.18%), Postives = 30/55 (54.55%), Query Frame = 1 Query: 637 VG*KIPRVTLHIGDGFAFVKAGRETPVNVLNLEIPYD*MVPRQKILIHHPFFTSL 801 +G + PRV L IGDG AF+K E + + ++ D + P K L PFF S+ Sbjct: 169 IGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVD-SSDPIGP-AKELFEKPFFQSV 221
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPDE_NICSY (Spermidine synthase OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 1.818e-67 Identity = 124/156 (79.49%), Postives = 134/156 (85.90%), Query Frame = 3 Query: 186 ANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 AN+NNNG +N+ P ISSV+PGWFSEISP+WPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVL+LDGVIQLTERDECAYQEMI HLPLCSIPNPK VLVIGGGDG VLRE+SRHSSVE+ DI EIDKM +V KQFFPDV +DP Sbjct: 4 ANHNNNGC------TNESP-YISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMIAHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVEVSKQFFPDVAVGYEDP 152 HSP 2 Score: 32.3426 bits (72), Expect = 1.818e-67 Identity = 22/55 (40.00%), Postives = 31/55 (56.36%), Query Frame = 1 Query: 637 VG*KIPRVTLHIGDGFAFVKAGRETPVNVLNLEIPYD*MVPRQKILIHHPFFTSL 801 VG + PRV LHIGDG AF+K + + ++ D + P Q+ L PFF S+ Sbjct: 147 VGYEDPRVNLHIGDGVAFLKNVAAGTYDAVIVD-SSDPIGPAQE-LFEKPFFESI 199
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPD1_HYONI (Spermidine synthase 1 OS=Hyoscyamus niger PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 3.091e-67 Identity = 121/157 (77.07%), Postives = 133/157 (84.71%), Query Frame = 3 Query: 183 EANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 E N +NG ++ K+ ISSV+PGWFSEISP+WPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVL+LDGVIQLTERDECAYQEMITHLPLCSIPNPK VLVIGGGDG VLRE+SRHSSVE+ DI EIDKM +V K+FFPDV +DP Sbjct: 2 EVTNQSNGC----SNNEKESPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVVEVAKEFFPDVAVGYEDP 154 HSP 2 Score: 33.113 bits (74), Expect = 3.091e-67 Identity = 24/57 (42.11%), Postives = 30/57 (52.63%), Query Frame = 1 Query: 637 VG*KIPRVTLHIGDGFAFVKAGRETPVNVLNLEI--PYD*MVPRQKILIHHPFFTSL 801 VG + PRV LHIGDG AF+K P + I D + P Q+ L PFF S+ Sbjct: 149 VGYEDPRVNLHIGDGVAFLK---NVPAGTYDAVIVDSSDPIGPAQE-LFEKPFFESI 201
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPD1_DATST (Spermidine synthase 1 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 3.092e-67 Identity = 120/146 (82.19%), Postives = 129/146 (88.36%), Query Frame = 3 Query: 216 MEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 ME +NK+ ISS++PGWFSEISP+WPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPK VLVIGGGDG VLRE+SRHSSVE+ DI EIDKM V KQFFP+V +DP Sbjct: 1 MEEANNKESPYISSILPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVSRHSSVEQIDICEIDKMVIDVSKQFFPNVAIGYEDP 146 HSP 2 Score: 33.113 bits (74), Expect = 3.092e-67 Identity = 21/55 (38.18%), Postives = 32/55 (58.18%), Query Frame = 1 Query: 637 VG*KIPRVTLHIGDGFAFVKAGRETPVNVLNLEIPYD*MVPRQKILIHHPFFTSL 801 +G + PRV LH+GDG AF+K E + + ++ D + P Q+ L PFF S+ Sbjct: 141 IGYEDPRVKLHVGDGVAFLKFVAEGTYDAVIVD-SSDPIGPAQE-LFEKPFFESV 193
BLAST of DY258681 vs. ExPASy Swiss-Prot
Match: SPDE_COFAR (Spermidine synthase OS=Coffea arabica PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 1.520e-66 Identity = 116/138 (84.06%), Postives = 123/138 (89.13%), Query Frame = 3 Query: 240 PDCISSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKNVLVIGGGDGEVLREISRHSSVEKNDIQEIDKMAFKVPKQFFPDVPGWLKDP 653 PD +SSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVL+LDGVIQLTERDECAYQEMI HLPLCSIP+PK VLVIGGGDG VLRE++RH SVE+ DI EIDKM V KQFFPDV +DP Sbjct: 17 PDGVSSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMIAHLPLCSIPSPKKVLVIGGGDGGVLREVARHLSVEQIDICEIDKMVVDVSKQFFPDVAVGFEDP 154 HSP 2 Score: 36.5798 bits (83), Expect = 1.520e-66 Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 637 VG*KIPRVTLHIGDGFAFVKAGRETPVNVLNLEIPYD*MVPRQKILIHHPFFTSL 801 VG + PRV LHIGDG AF+KA E + + ++ D + P Q+ L PFF S+ Sbjct: 149 VGFEDPRVVLHIGDGVAFLKAVPEGTYDAIIVD-SSDPIGPAQE-LFEKPFFESV 201 The following BLAST results are available for this feature:
BLAST of DY258681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 203
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Sequences
The
following sequences are available for this feature:
EST sequence >DY258681 ID=DY258681; Name=DY258681; organism=Citrus clementina; type=EST; length=1283bpback to top |