DY260049
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY260049 vs. ExPASy Swiss-Prot
Match: Y205_BACP2 (UPF0176 protein BPUM_0205 OS=Bacillus pumilus (strain SAFR-032) GN=BPUM_0205 PE=3 SV=1) HSP 1 Score: 45.4394 bits (106), Expect = 1.723e-13 Identity = 36/124 (29.03%), Postives = 56/124 (45.16%), Query Frame = 2 Query: 269 VGGKLSSLESHIDAVKSISLFEGTDFKLASSDYPLSDKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPV 640 V G + + +++A+K F K+ +D H F + +R ELV S +NP +++ G+HLS VEF+ +QS V++DARN YE +G FR V Sbjct: 50 VSGTIEQTDKYMEALKEDPRFASMPIKIDEAD-------GH--AFKKMHVRHRNELVNLSLEDDVNPLELT--GKHLSPVEFYEQMQS-------------PDTVVIDARNDYEFDVGHFRGAV 149 HSP 2 Score: 42.3578 bits (98), Expect = 1.723e-13 Identity = 20/50 (40.00%), Postives = 31/50 (62.00%), Query Frame = 3 Query: 24 QEQYGVLLYYKYSTIPDLNSLFPFYESNCSSLGLLGRVRLPPHGVHVTVT 173 ++QY VLLYY+Y I D + + + C LGLLGR+ + G++ TV+ Sbjct: 2 EKQYRVLLYYQYVPIEDPETFTAEHLAFCKELGLLGRILISSEGINGTVS 51 HSP 3 Score: 28.4906 bits (62), Expect = 1.723e-13 Identity = 11/26 (42.31%), Postives = 16/26 (61.54%), Query Frame = 1 Query: 655 PEIRPFSDLPHWIDKYAEPMQGKPVL 732 P+I F +LP WI E ++GK +L Sbjct: 151 PDIETFRELPEWIRDNKEILEGKKIL 176
BLAST of DY260049 vs. ExPASy Swiss-Prot
Match: Y085_ONYPE (UPF0176 protein PAM_085 OS=Onion yellows phytoplasma GN=PAM_085 PE=3 SV=2) HSP 1 Score: 42.3578 bits (98), Expect = 8.144e-11 Identity = 20/53 (37.74%), Postives = 32/53 (60.38%), Query Frame = 3 Query: 21 SQEQYGVLLYYKYSTIPDLNSLFPFYESNCSSLGLLGRVRLPPHGVHVTVTYP 179 S QY V+LYY+Y+ I D + + C S+GLLGR+ + G++ T++ P Sbjct: 5 SNSQYLVILYYQYAPIKDPQTFRDQHFKYCESIGLLGRIIVAQEGINGTLSGP 57 HSP 2 Score: 37.7354 bits (86), Expect = 8.144e-11 Identity = 36/124 (29.03%), Postives = 53/124 (42.74%), Query Frame = 2 Query: 269 VGGKLSSLESHIDAVKSISLFEGTDFKLASSDYPLSDKVAHECGFTSLSIRIVKELVTFSSHPLLNPPDVSNAGRHLSAVEFHSILQSTGQVLDKENATDDKKLVLLDARNLYETRIGKFRTPV 640 + G + ++D +K F T FK+ + + AH F LSI++ ELV S N + G +L+ EF LQ +K ++LDARN YE +G FR V Sbjct: 54 LSGPEEQIHKYMDQLKQDPRFCNTVFKMETVE-------AHV--FPRLSIKVKPELVNLSLQE--NVDLTKDKGAYLAPQEFLQALQ-------------EKDTLILDARNDYEYDLGHFRNAV 153 HSP 3 Score: 26.9498 bits (58), Expect = 8.144e-11 Identity = 9/28 (32.14%), Postives = 18/28 (64.29%), Query Frame = 1 Query: 649 LDPEIRPFSDLPHWIDKYAEPMQGKPVL 732 ++P IR F DLP+W+ + ++ K ++ Sbjct: 153 VNPNIRHFRDLPNWVKQNTHLLKDKKIV 180 The following BLAST results are available for this feature:
BLAST of DY260049 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260049 ID=DY260049; Name=DY260049; organism=Citrus clementina; type=EST; length=732bpback to top |