DY260142
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.386e-53 Identity = 84/107 (78.50%), Postives = 92/107 (85.98%), Query Frame = 1 Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579 GGACGYGNLYS+GYGTNTAALSTALFNNG+SCGACFEI+C ND +WC PGSI VTATNFC GGWCNPPQQHFDLSQPVF++IAQY+AGIVPV+YRR P Sbjct: 45 GGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVP 151 HSP 2 Score: 43.1282 bits (100), Expect = 1.386e-53 Identity = 18/22 (81.82%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 105 GQGWTDAPATFYGGGDASGTMG 170 G GW +A ATFYGGGDASGTMG Sbjct: 24 GGGWVNAHATFYGGGDASGTMG 45
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.338e-52 Identity = 80/107 (74.77%), Postives = 91/107 (85.05%), Query Frame = 1 Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579 GGACGYGNLYS+GYGT+TAALSTALFNNG+SCG+CFEI+C ND +WC PGSI VTATNFC GGWCNPP +HFDL+QPVF++IAQY+AGIVPVSYRR P Sbjct: 44 GGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVP 150 HSP 2 Score: 45.4394 bits (106), Expect = 3.338e-52 Identity = 19/23 (82.61%), Postives = 20/23 (86.96%), Query Frame = 3 Query: 102 YGQGWTDAPATFYGGGDASGTMG 170 YG GW +A ATFYGGGDASGTMG Sbjct: 22 YGGGWINAHATFYGGGDASGTMG 44
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 2.134e-51 Identity = 82/107 (76.64%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579 GGACGYGNLYS+GYGTNTAALSTALFNNG+SCGACFEIKC +D WC PG+I VTATNFC GGWCNPP HFDLSQPVF++IAQYKAG+VPVSYRR P Sbjct: 48 GGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVP 154 HSP 2 Score: 41.2022 bits (95), Expect = 2.134e-51 Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3 Query: 102 YGQGWTDAPATFYGGGDASGTMG 170 Y GW +A ATFYGG DASGTMG Sbjct: 26 YDAGWVNAHATFYGGSDASGTMG 48
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.482e-49 Identity = 81/109 (74.31%), Postives = 90/109 (82.57%), Query Frame = 1 Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579 GGACGYGNLYS+GYGTNTAALSTALFNNGMSCGACFE+KC NDP+WC G SI +TATNFC GGWCNPP++HFDL+ PVF +IAQY+AGIVPVSYRR P Sbjct: 49 GGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVP 157 HSP 2 Score: 38.1206 bits (87), Expect = 1.482e-49 Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 105 GQGWTDAPATFYGGGDASGTMG 170 G W +A ATFYGG DASGTMG Sbjct: 28 GGAWQNAHATFYGGSDASGTMG 49
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.482e-49 Identity = 77/105 (73.33%), Postives = 86/105 (81.90%), Query Frame = 1 Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR 573 GGACGYGNLYS+GYGTNTAALSTALFN G SCGACF+IKCV+DP+WC G+I VT TNFC GGWCNPPQ HFDL+QP+F +IAQYKAG+VPV YRR Sbjct: 47 GGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRR 151 HSP 2 Score: 41.9726 bits (97), Expect = 1.482e-49 Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3 Query: 102 YGQGWTDAPATFYGGGDASGTMG 170 Y GW +A ATFYGG DASGTMG Sbjct: 25 YSSGWVNARATFYGGADASGTMG 47
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXP16_ARATH (Expansin-A16 OS=Arabidopsis thaliana GN=EXPA16 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 3.281e-49 Identity = 79/107 (73.83%), Postives = 90/107 (84.11%), Query Frame = 1 Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR 573 GGACGYGNLYS+GYGTNTAALST+LFN+G SCGACFEIKCVNDP+WC PG S+FVTATNFC GGWCNPP+ HFDL+ PVF +IA+Y+AGIVP+SYRR Sbjct: 52 GGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRR 158 HSP 2 Score: 37.3502 bits (85), Expect = 3.281e-49 Identity = 16/22 (72.73%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 105 GQGWTDAPATFYGGGDASGTMG 170 G W A ATFYGG DASGTMG Sbjct: 31 GGSWQTAHATFYGGNDASGTMG 52
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXPA6_ARATH (Expansin-A6 OS=Arabidopsis thaliana GN=EXPA6 PE=2 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 1.340e-47 Identity = 76/109 (69.72%), Postives = 88/109 (80.73%), Query Frame = 1 Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579 GGACGYGNLYS+GYG NTAALSTALFNNG SCGACFE+KC +DP+WC G SIF+TATNFC GGWCNPP+ HFDL+ P+F +IA+Y+AGIVPVS+RR P Sbjct: 49 GGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVSFRRVP 157 HSP 2 Score: 39.6614 bits (91), Expect = 1.340e-47 Identity = 17/22 (77.27%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 105 GQGWTDAPATFYGGGDASGTMG 170 G GW A ATFYGG DASGTMG Sbjct: 28 GGGWETAHATFYGGSDASGTMG 49
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXPA3_ARATH (Expansin-A3 OS=Arabidopsis thaliana GN=EXPA3 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.276e-47 Identity = 79/109 (72.48%), Postives = 87/109 (79.82%), Query Frame = 1 Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579 GGACGYGNLYS+GYG NTAALSTALFNNG SCGACFEIKC +DPRWC PG SI VTATNFC GGWCNPP++HFDL+ P+F +I Y+AGIVPVSYRR P Sbjct: 54 GGACGYGNLYSQGYGVNTAALSTALFNNGFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMPMFLKIGLYRAGIVPVSYRRVP 162 HSP 2 Score: 37.3502 bits (85), Expect = 2.276e-47 Identity = 16/22 (72.73%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 105 GQGWTDAPATFYGGGDASGTMG 170 G W +A ATFYGG DASGTMG Sbjct: 33 GGPWQNAHATFYGGSDASGTMG 54
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 2.967e-47 Identity = 78/109 (71.56%), Postives = 89/109 (81.65%), Query Frame = 1 Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579 GGACGYGNLYS+GYG NTAALSTALFNNG+SCG+CFE+KC+NDP WC PG SI +TATNFC GGWCNPP++HFDL+ P+F IA+YKAGIVPVSYRR P Sbjct: 50 GGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIP 158 HSP 2 Score: 34.2686 bits (77), Expect = 2.967e-47 Identity = 15/22 (68.18%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 105 GQGWTDAPATFYGGGDASGTMG 170 G W +A ATFYG DASGTMG Sbjct: 29 GGPWINAHATFYGEADASGTMG 50
BLAST of DY260142 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.454e-46 Identity = 76/107 (71.03%), Postives = 87/107 (81.31%), Query Frame = 1 Query: 259 GGACGYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRR*P 579 GGACGYGNLY +GYGTNTAALSTALFNNG++CGAC+E+KC +DPRWC +I VTATNFC GGWCNPP QHFDL++P F QIAQY+AGIVPVS+RR P Sbjct: 48 GGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVP 154 HSP 2 Score: 35.8094 bits (81), Expect = 1.454e-46 Identity = 15/20 (75.00%), Postives = 15/20 (75.00%), Query Frame = 3 Query: 111 GWTDAPATFYGGGDASGTMG 170 GW ATFYGG DASGTMG Sbjct: 29 GWQGGHATFYGGEDASGTMG 48 The following BLAST results are available for this feature:
BLAST of DY260142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260142 ID=DY260142; Name=DY260142; organism=Citrus clementina; type=EST; length=1067bpback to top |