DY262450
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H2_ARATH (Zinc finger CCCH domain-containing protein 2 OS=Arabidopsis thaliana GN=At1g03790 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 6.156e-58 Identity = 105/152 (69.08%), Postives = 112/152 (73.68%), Query Frame = 2 Query: 416 HFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILPEIXXXXXXXXXXXXXXXQKIXXXXXXXXXXXXVNSSPTSTLLGNM 871 HFRM+EFKIRRCTRSRSHDWTDCPFAHP EKARRRDPRR+ YSG VC E+RRGG CS GDDCEFAHGVFECWLHP RYRTEACKDGK+CKRKVCFFAHSPRQLR+LP +SSPTSTLLGN+ Sbjct: 82 HFRMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGGDCSRGDDCEFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLP----------PENVSGVSASPSPAAKNPCCLFCSSSPTSTLLGNL 223
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H61_ARATH (Zinc finger CCCH domain-containing protein 61 OS=Arabidopsis thaliana GN=At5g44260 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.676e-55 Identity = 92/107 (85.98%), Postives = 99/107 (92.52%), Query Frame = 2 Query: 416 HFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILP 736 HFRMYEFKIRRCTRSRSHDWTDCPF+HP EKARRRDPRR+HY+G VC E+ R G CS GD+C FAHGVFECWLHPSRYRTEACKDGK+CKRKVCFFAHSPRQLR+LP Sbjct: 60 HFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGDCSRGDECGFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVLP 166
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H49_ARATH (Zinc finger CCCH domain-containing protein 49 OS=Arabidopsis thaliana GN=At4g29190 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 5.223e-49 Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = 2 Query: 416 HFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRIL 733 HFRMY+FK+RRC R RSHDWT+CP+AHP EKARRRDPR+YHYSG C ++R+ GGC GD CEFAHGVFECWLHP+RYRT+ CKDG NC RK+CFFAHSP QLR L Sbjct: 79 HFRMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRK-GGCKKGDSCEFAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLRFL 183
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H20_ARATH (Zinc finger CCCH domain-containing protein 20 OS=Arabidopsis thaliana GN=At2g19810 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 8.910e-49 Identity = 79/107 (73.83%), Postives = 93/107 (86.92%), Query Frame = 2 Query: 416 HFRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILP 736 HFRMYEFK+RRC R RSHDWT+CP+AHP EKARRRDPR++HYSG C E+R+ G C GD CEF+HGVFECWLHP+RYRT+ CKDG NC+R+VCFFAHSP Q+R+LP Sbjct: 78 HFRMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRK-GCCKRGDACEFSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIRVLP 183
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H2_ORYSJ (Zinc finger CCCH domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=Os01g0192000 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.985e-48 Identity = 79/106 (74.53%), Postives = 92/106 (86.79%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILP 736 FRMYEFK+RRC R RSHDWT+CPFAHP EKARRRDPR+YHYSG C ++R+ GGC GD CE+AHGVFECWLHP+RYRT+ CKDG C+R+VCFFAH+P QLR+LP Sbjct: 77 FRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRK-GGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLP 181
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H35_ORYSJ (Zinc finger CCCH domain-containing protein 35 OS=Oryza sativa subsp. japonica GN=Os05g0195200 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 7.542e-48 Identity = 80/106 (75.47%), Postives = 91/106 (85.85%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILP 736 FRMYEFK+RRC R RSHDWT+CPFAHP EKARRRDPRRY YSG C ++R+GG C GD CEFAHGVFECWLHP+RYRT+ CKDG C+R+VCFFAH+P QLR+LP Sbjct: 78 FRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRRYCYSGTACPDFRKGG-CKRGDACEFAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLP 182
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H23_ARATH (Zinc finger CCCH domain-containing protein 23 OS=Arabidopsis thaliana GN=At2g25900 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 2.866e-47 Identity = 77/106 (72.64%), Postives = 91/106 (85.85%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRILP 736 FR+YEFKIRRC R RSHDWT+CPFAHP EKARRRDPR++HYSG C E+R+ G C GD CEF+HGVFECWLHPSRYRT+ CKDG +C+R++CFFAH+ QLR+LP Sbjct: 91 FRIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRK-GSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLP 195
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H67_ORYSJ (Zinc finger CCCH domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=Os12g0515500 PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.799e-41 Identity = 69/105 (65.71%), Postives = 83/105 (79.05%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRIL 733 FRMY FK+R C+R+ SHDWT+CPF HP E ARRRDPR+YHYS C E+++G GC GD CE+AHGVFE WLHP++YRT CKDG C R+VCFFAH+P +LR L Sbjct: 174 FRMYSFKVRACSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFKKGAGCRRGDMCEYAHGVFESWLHPAQYRTRLCKDGVGCARRVCFFAHTPDELRPL 278
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H66_ARATH (Zinc finger CCCH domain-containing protein 66 OS=Arabidopsis thaliana GN=At5g58620 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.069e-41 Identity = 70/105 (66.67%), Postives = 83/105 (79.05%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLRIL 733 FRMY FKI+ C+R+ SHDWT+CPF HP E ARRRDPR+YHYS C E+R+G CS GD CE+AHG+FECWLHP++YRT CKD NC R+VCFFAH P +LR L Sbjct: 210 FRMYAFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPEFRKGS-CSRGDTCEYAHGIFECWLHPAQYRTRLCKDETNCSRRVCFFAHKPEELRPL 313
BLAST of DY262450 vs. ExPASy Swiss-Prot
Match: C3H33_ORYSJ (Zinc finger CCCH domain-containing protein 33 OS=Oryza sativa subsp. japonica GN=Os05g0128200 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.166e-40 Identity = 67/103 (65.05%), Postives = 80/103 (77.67%), Query Frame = 2 Query: 419 FRMYEFKIRRCTRSRSHDWTDCPFAHPSEKARRRDPRRYHYSGAVCSEYRRGGGCSLGDDCEFAHGVFECWLHPSRYRTEACKDGKNCKRKVCFFAHSPRQLR 727 FRMY FK++ C+R+ SHDWT+CPF HP E ARRRDPRRY YS C E+R+GG C GD CE+AHGVFECWLHP++YRT CKD C R++CFFAH P +LR Sbjct: 213 FRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRRYSYSCVPCPEFRKGGSCRKGDACEYAHGVFECWLHPAQYRTRLCKDEVGCARRICFFAHKPDELR 315 The following BLAST results are available for this feature:
BLAST of DY262450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262450 ID=DY262450; Name=DY262450; organism=Citrus clementina; type=EST; length=1305bpback to top |