Citrus australis genome v1.0 (UQ)

Homology

Homology of the Citrus australis Genome v1.0 proteins was determined by pairwise sequence comparison using the blastp algorithm against various protein databases. An expectation value cutoff less than 1e-9 was used for the NCBI nr (Release 2021-09) and 1e-6  for the Arabidoposis proteins (Araport11), UniProtKB/SwissProt (Release 2021-09), and UniProtKB/TrEMBL (Release 2021-09) databases. The best hit reports are available for download in Excel format. 

 

Protein Homologs

Citrus australis v1.0 proteins with arabidopsis (Araport11) homologs (EXCEL file) Citrus_australis_v1.0_vs_arabidopsis.xlsx.gz
Citrus australis v1.0 proteins with arabidopsis (Araport11) (FASTA file) Citrus_australis_v1.0_vs_arabidopsis_hit.fasta.gz
Citrus australis v1.0 proteins without arabidopsis (Araport11) (FASTA file) Citrus_australis_v1.0_vs_arabidopsis_noHit.fasta.gz
Citrus australis v1.0 proteins with SwissProt homologs (EXCEL file) Citrus_australis_v1.0_vs_swissprot.xlsx.gz
Citrus australis v1.0 proteins with SwissProt (FASTA file) Citrus_australis_v1.0_vs_swissprot_hit.fasta.gz
Citrus australis v1.0 proteins without SwissProt (FASTA file) Citrus_australis_v1.0_vs_swissprot_noHit.fasta.gz
Citrus australis v1.0 proteins with TrEMBL homologs (EXCEL file) Citrus_australis_v1.0_vs_trembl.xlsx.gz
Citrus australis v1.0 proteins with TrEMBL (FASTA file) Citrus_australis_v1.0_vs_trembl_hit.fasta.gz
Citrus australis v1.0 proteins without TrEMBL (FASTA file) Citrus_australis_v1.0_vs_trembl_noHit.fasta.gz