CF832741
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_HORVU (Xylose isomerase OS=Hordeum vulgare GN=XYLA PE=1 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 3.892e-64 Identity = 121/144 (84.03%), Postives = 128/144 (88.89%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 GNIDANTGDPQVGWDTD+FLTDI EATLIM SV+KN GLAPGGFNF AKLRRESTDVEDLFIAHI GMDT+ARG R KLIEDGSL ELVRKRYQSFD+EIG IEAGK DFE LEKKA+EWGEP VPS KQELAEM+FQSA+ Sbjct: 336 GNIDANTGDPQVGWDTDEFLTDISEATLIMSSVVKNDGLAPGGFNFYAKLRRESTDVEDLFIAHISGMDTMARGRRNVVKLIEDGSLDELVRKRYQSFDTEIGAMIEAGKGDFETLEKKALEWGEPTVPSGKQELAEMLFQSAL 479
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_ARATH (Xylose isomerase OS=Arabidopsis thaliana GN=XYLA PE=2 SV=2) HSP 1 Score: 242.276 bits (617), Expect = 1.932e-63 Identity = 117/144 (81.25%), Postives = 133/144 (92.36%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 GNIDANTGD Q GWDTDQFLTD+GEAT++M+SVIKNGG+APGGFNFDAKLRRESTDVEDLFIAHI GMDT+ARGLR A K++E+GSL ELVRKRY ++DSE+G++IE GKADFE LEKKA E+GEPKV SAKQELAEMIFQSA+ Sbjct: 334 GNIDANTGDAQTGWDTDQFLTDVGEATMVMMSVIKNGGIAPGGFNFDAKLRRESTDVEDLFIAHISGMDTMARGLRNAVKILEEGSLSELVRKRYATWDSELGKQIEEGKADFEYLEKKAKEFGEPKVSSAKQELAEMIFQSAM 477
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_THEP1 (Xylose isomerase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=xylA PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.476e-35 Identity = 76/144 (52.78%), Postives = 97/144 (67.36%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G+IDAN GD +GWDTDQF T+I + TL M VIK GG GG NFDAK+RR S VEDLFI HIVGMDT A G + A KL++D L + ++Y+SF IG++I GKADFE LE+ ++ + ++PS KQE E + S I Sbjct: 293 GSIDANQGDLLLGWDTDQFPTNIYDTTLAMYEVIKAGGFTKGGLNFDAKVRRASYKVEDLFIGHIVGMDTFALGFKIAYKLVKDEVLDRFIEEKYRSFKEGIGKEIVEGKADFEKLEEYIIDKEDIELPSGKQEYLESLLNSYI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_THENN (Xylose isomerase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=xylA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.461e-34 Identity = 74/144 (51.39%), Postives = 95/144 (65.97%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G+IDAN GD +GWDTDQF T++ + TL M VIK GG GG NFDAK+RR S VEDLFI HI GMDT A G + A KL++DG L + + ++Y+SF IG+ I GK DFE LE+ ++ ++PS KQE E + S I Sbjct: 293 GSIDANQGDLLLGWDTDQFPTNVYDTTLAMYEVIKAGGFTKGGLNFDAKVRRASYKVEDLFIGHIAGMDTFALGFKVAYKLVKDGVLDKFIEEKYRSFREGIGRDIVEGKVDFEKLEEYIIDKETIELPSGKQEYLESLINSYI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_THENE (Xylose isomerase OS=Thermotoga neapolitana GN=xylA PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.461e-34 Identity = 74/144 (51.39%), Postives = 95/144 (65.97%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G+IDAN GD +GWDTDQF T++ + TL M VIK GG GG NFDAK+RR S VEDLFI HI GMDT A G + A KL++DG L + + ++Y+SF IG+ I GK DFE LE+ ++ ++PS KQE E + S I Sbjct: 293 GSIDANQGDLLLGWDTDQFPTNVYDTTLAMYEVIKAGGFTKGGLNFDAKVRRASYKVEDLFIGHIAGMDTFALGFKVAYKLVKDGVLDKFIEEKYRSFREGIGRDIVEGKVDFEKLEEYIIDKETIELPSGKQEYLESLINSYI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_BACA2 (Xylose isomerase OS=Bacillus amyloliquefaciens (strain FZB42) GN=xylA PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.461e-34 Identity = 72/144 (50.00%), Postives = 96/144 (66.67%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G++DAN GDP +GWDTD+F TD+ ATL M ++KNGGL GG NFDAK+RR S + +DL AH+ GMDT ARGL+ A KLIED ++++ RY+SF IG +I G+ADF+ LE+ A+ K S +QE + I I Sbjct: 299 GSVDANQGDPLLGWDTDEFPTDLYSATLAMYEILKNGGLGSGGLNFDAKVRRSSFEPDDLLYAHVAGMDTFARGLKAARKLIEDRVFEDVIQHRYRSFTEGIGLEIAEGRADFKTLEQYALNNQPIKNESGRQERLKAILNQYI 442
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_THESA (Xylose isomerase OS=Thermoanaerobacter saccharolyticum GN=xylA PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.214e-34 Identity = 74/139 (53.24%), Postives = 92/139 (66.19%), Query Frame = -3 Query: 288 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMI 704 G+IDANTGD +GWDTDQF TDI TL M VIK GG GG NFDAK+RR S + EDLF+ HI GMD A+G + A KL++DG + + +RY S+ IG I +GKADF+ LEK A+E + S +QEL E I Sbjct: 293 GSIDANTGDMLLGWDTDQFPTDIRMTTLAMYEVIKMGGFDKGGLNFDAKVRRASFEPEDLFLGHIAGMDAFAKGFKVAYKLVKDGVFDKFIEERYASYKEGIGADIVSGKADFKSLEKYALEHSQIVNKSGRQELLESI 431
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_THESQ (Xylose isomerase OS=Thermotoga sp. (strain RQ2) GN=xylA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.198e-34 Identity = 74/144 (51.39%), Postives = 95/144 (65.97%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G+IDAN GD +GWDTDQF T+I + TL M VIK GG GG NFDAK+RR S VEDLFI HI GMDT A G + A KL +DG + + ++Y+SF IG++I GK DFE LE+ ++ + ++PS KQE E + S I Sbjct: 293 GSIDANQGDLLLGWDTDQFPTNIYDTTLAMYEVIKAGGFTKGGLNFDAKVRRASYKVEDLFIGHIAGMDTFALGFKIAYKLAKDGVFDKFIEEKYRSFKEGIGKEIVEGKTDFEKLEEYIIDKEDIELPSGKQEYLESLLNSYI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_THEMA (Xylose isomerase OS=Thermotoga maritima GN=xylA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.198e-34 Identity = 74/144 (51.39%), Postives = 95/144 (65.97%), Query Frame = -3 Query: 273 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAI 704 G+IDAN GD +GWDTDQF T+I + TL M VIK GG GG NFDAK+RR S VEDLFI HI GMDT A G + A KL +DG + + ++Y+SF IG++I GK DFE LE+ ++ + ++PS KQE E + S I Sbjct: 293 GSIDANQGDLLLGWDTDQFPTNIYDTTLAMYEVIKAGGFTKGGLNFDAKVRRASYKVEDLFIGHIAGMDTFALGFKIAYKLAKDGVFDKFIEEKYRSFKEGIGKEIVEGKTDFEKLEEYIIDKEDIELPSGKQEYLESLLNSYI 436
BLAST of CF832741 vs. ExPASy Swiss-Prot
Match: XYLA_HAES2 (Xylose isomerase OS=Haemophilus somnus (strain 2336) GN=xylA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.198e-34 Identity = 76/143 (53.15%), Postives = 95/143 (66.43%), Query Frame = -3 Query: 279 GNIDANTGDPQVGWDTDQFLTDIGEATLIMLSVIKNGGLAPGGFNFDAKLRRESTDVEDLFIAHIVGMDTVARGLRTAAKLIEDGSLPELVRKRYQSFDSEIGQKIEAGKADFEMLEKKAMEWG-EPKVPSAKQELAEMIFQS 704 G+IDAN GDPQ+GWDTDQF + E TL M ++K GG GGFNFDAK+RR+STD DLF AHI MD +A L+ AAK+IED +L ++V RY +D E+GQKI +GKA E L K G +PK S +QE E + S Sbjct: 293 GSIDANRGDPQLGWDTDQFPNSVEENTLAMYEILKAGGFTTGGFNFDAKIRRQSTDPYDLFHAHIGAMDVLALSLKRAAKMIEDQTLQKVVDNRYAGWDQELGQKILSGKASLEDLAKIVETQGLDPKPVSGQQEYLENLVNS 435 The following BLAST results are available for this feature:
BLAST of CF832741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832741 ID=CF832741; Name=CF832741; organism=Citrus sinensis; type=EST; length=706bpback to top |