Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG033_493948083_49394808marker_locus146.2 cM
Citrus-P.trifoliata-consensus-2018.LG033_497482353_49748235marker_locus147.94 cM
Citrus-P.trifoliata-consensus-2018.LG033_498233103_49823310marker_locus148.39 cM
Citrus-P.trifoliata-consensus-2018.LG033_502428163_50242816marker_locus150.86 cM
Citrus-P.trifoliata-consensus-2018.LG033_505656213_50565621marker_locus152.89 cM
Citrus-P.trifoliata-consensus-2018.LG033_509620643_50962064marker_locus153.8 cM
Citrus-P.trifoliata-consensus-2018.LG033_506531073_50653107marker_locus155.24 cM
Citrus-P.trifoliata-consensus-2018.LG044_2954884_295488marker_locus0 cM
Citrus-P.trifoliata-consensus-2018.LG044_5426234_542623marker_locus2.66 cM
Citrus-P.trifoliata-consensus-2018.LG044_6673454_667345marker_locus5.07 cM
Citrus-P.trifoliata-consensus-2018.LG044_11205504_1120550marker_locus10 cM
Citrus-P.trifoliata-consensus-2018.LG044_17931954_1793195marker_locus13.36 cM
Citrus-P.trifoliata-consensus-2018.LG044_15304074_1530407marker_locus14.02 cM
Citrus-P.trifoliata-consensus-2018.LG044_18170254_1817025marker_locus14.55 cM
Citrus-P.trifoliata-consensus-2018.LG044_21459044_2145904marker_locus16.14 cM
Citrus-P.trifoliata-consensus-2018.LG044_22894314_2289431marker_locus18.08 cM
Citrus-P.trifoliata-consensus-2018.LG044_24630954_2463095marker_locus21.51 cM
Citrus-P.trifoliata-consensus-2018.LG044_28043524_2804352marker_locus25.16 cM
Citrus-P.trifoliata-consensus-2018.LG044_30302724_3030272marker_locus27.63 cM
Citrus-P.trifoliata-consensus-2018.LG044_33793224_3379322marker_locus29.26 cM
Citrus-P.trifoliata-consensus-2018.LG044_39017064_3901706marker_locus33.7 cM
Citrus-P.trifoliata-consensus-2018.LG044_37744184_3774418marker_locus34.44 cM
Citrus-P.trifoliata-consensus-2018.LG044_62927344_6292734marker_locus35.46 cM
Citrus-P.trifoliata-consensus-2018.LG044_40494354_4049435marker_locus35.66 cM
Citrus-P.trifoliata-consensus-2018.LG044_68331424_6833142marker_locus37.13 cM
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Map QTL
This map contains 14 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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