Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG066_189455036_18945503marker_locus40.07 cM
Citrus-P.trifoliata-consensus-2018.LG066_195329136_19532913marker_locus41.98 cM
Citrus-P.trifoliata-consensus-2018.LG066_198375976_19837597marker_locus43.38 cM
Citrus-P.trifoliata-consensus-2018.LG066_197486046_19748604marker_locus43.84 cM
Citrus-P.trifoliata-consensus-2018.LG066_202495646_20249564marker_locus49.74 cM
Citrus-P.trifoliata-consensus-2018.LG066_205662626_20566262marker_locus51.17 cM
Citrus-P.trifoliata-consensus-2018.LG066_206578246_20657824marker_locus51.5 cM
Citrus-P.trifoliata-consensus-2018.LG066_213281076_21328107marker_locus54.37 cM
Citrus-P.trifoliata-consensus-2018.LG066_216503816_21650381marker_locus57.21 cM
Citrus-P.trifoliata-consensus-2018.LG066_223732016_22373201marker_locus60.9 cM
Citrus-P.trifoliata-consensus-2018.LG066_225321426_22532142marker_locus61.65 cM
Citrus-P.trifoliata-consensus-2018.LG066_230244976_23024497marker_locus63.51 cM
Citrus-P.trifoliata-consensus-2018.LG066_237881936_23788193marker_locus67.55 cM
Citrus-P.trifoliata-consensus-2018.LG066_242339366_24233936marker_locus71.44 cM
Citrus-P.trifoliata-consensus-2018.LG066_246699246_24669924marker_locus71.99 cM
Citrus-P.trifoliata-consensus-2018.LG066_244334646_24433464marker_locus72.24 cM
Citrus-P.trifoliata-consensus-2018.LG066_250512146_25051214marker_locus73.74 cM
Citrus-P.trifoliata-consensus-2018.LG066_252707006_25270700marker_locus74.9 cM
Citrus-P.trifoliata-consensus-2018.LG066_254752916_25475291marker_locus75.78 cM
Citrus-P.trifoliata-consensus-2018.LG066_249477996_24947799marker_locus78.7 cM
Citrus-P.trifoliata-consensus-2018.LG077_7014827_701482marker_locus0 cM
Citrus-P.trifoliata-consensus-2018.LG077_777787_77778marker_locus2.36 cM
Citrus-P.trifoliata-consensus-2018.LG077_8832757_883275marker_locus4.41 cM
Citrus-P.trifoliata-consensus-2018.LG077_12472667_1247266marker_locus5.23 cM
Citrus-P.trifoliata-consensus-2018.LG077_18065577_1806557marker_locus8.6 cM
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Map QTL
This map contains 14 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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