Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG088_64366898_6436689marker_locus43.46 cM
Citrus-P.trifoliata-consensus-2018.LG088_66871528_6687152marker_locus43.55 cM
Citrus-P.trifoliata-consensus-2018.LG088_69305618_6930561marker_locus45.03 cM
Citrus-P.trifoliata-consensus-2018.LG088_76597588_7659758marker_locus45.91 cM
Citrus-P.trifoliata-consensus-2018.LG088_79122128_7912212marker_locus47.96 cM
Citrus-P.trifoliata-consensus-2018.LG088_96464378_9646437marker_locus48.72 cM
Citrus-P.trifoliata-consensus-2018.LG088_110582738_11058273marker_locus48.81 cM
Citrus-P.trifoliata-consensus-2018.LG088_82740318_8274031marker_locus50.15 cM
Citrus-P.trifoliata-consensus-2018.LG088_172646448_17264644marker_locus51.34 cM
Citrus-P.trifoliata-consensus-2018.LG088_175408668_17540866marker_locus53.26 cM
Citrus-P.trifoliata-consensus-2018.LG088_176363398_17636339marker_locus54.09 cM
Citrus-P.trifoliata-consensus-2018.LG088_181642518_18164251marker_locus54.93 cM
Citrus-P.trifoliata-consensus-2018.LG088_187283868_18728386marker_locus55.61 cM
Citrus-P.trifoliata-consensus-2018.LG088_193081948_19308194marker_locus57.07 cM
Citrus-P.trifoliata-consensus-2018.LG088_195723368_19572336marker_locus58.04 cM
Citrus-P.trifoliata-consensus-2018.LG088_203113228_20311322marker_locus59.75 cM
Citrus-P.trifoliata-consensus-2018.LG088_201720338_20172033marker_locus60.04 cM
Citrus-P.trifoliata-consensus-2018.LG088_210061988_21006198marker_locus66.74 cM
Citrus-P.trifoliata-consensus-2018.LG088_214699298_21469929marker_locus73.71 cM
Citrus-P.trifoliata-consensus-2018.LG088_216018508_21601850marker_locus75.01 cM
Citrus-P.trifoliata-consensus-2018.LG088_218910678_21891067marker_locus77.3 cM
Citrus-P.trifoliata-consensus-2018.LG088_220243788_22024378marker_locus78.34 cM
Citrus-P.trifoliata-consensus-2018.LG088_222111128_22211112marker_locus80.91 cM
Citrus-P.trifoliata-consensus-2018.LG088_224378368_22437836marker_locus82.95 cM
Citrus-P.trifoliata-consensus-2018.LG088_227895828_22789582marker_locus86.18 cM
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Map QTL
This map contains 14 QTL:
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Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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