Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG088_228527078_22852707marker_locus86.68 cM
Citrus-P.trifoliata-consensus-2018.LG088_232753838_23275383marker_locus90.79 cM
Citrus-P.trifoliata-consensus-2018.LG088_234490188_23449018marker_locus91.52 cM
Citrus-P.trifoliata-consensus-2018.LG088_239479918_23947991marker_locus94.56 cM
Citrus-P.trifoliata-consensus-2018.LG088_240677738_24067773marker_locus95.16 cM
Citrus-P.trifoliata-consensus-2018.LG088_237631148_23763114marker_locus96.46 cM
Citrus-P.trifoliata-consensus-2018.LG088_243290868_24329086marker_locus99.6 cM
Citrus-P.trifoliata-consensus-2018.LG088_249186338_24918633marker_locus100.35 cM
Citrus-P.trifoliata-consensus-2018.LG088_246122908_24612290marker_locus101.52 cM
Citrus-P.trifoliata-consensus-2018.LG088_244956648_24495664marker_locus102.77 cM
Citrus-P.trifoliata-consensus-2018.LG099_1735349_173534marker_locus0 cM
Citrus-P.trifoliata-consensus-2018.LG099_6950589_695058marker_locus2.11 cM
Citrus-P.trifoliata-consensus-2018.LG099_5710749_571074marker_locus3.33 cM
Citrus-P.trifoliata-consensus-2018.LG099_10017509_1001750marker_locus4.22 cM
Citrus-P.trifoliata-consensus-2018.LG099_9085319_908531marker_locus4.96 cM
Citrus-P.trifoliata-consensus-2018.LG099_13142539_1314253marker_locus6.85 cM
Citrus-P.trifoliata-consensus-2018.LG099_17962119_1796211marker_locus11.46 cM
Citrus-P.trifoliata-consensus-2018.LG099_21360409_2136040marker_locus11.95 cM
Citrus-P.trifoliata-consensus-2018.LG099_22762469_2276246marker_locus12.67 cM
Citrus-P.trifoliata-consensus-2018.LG099_24360439_2436043marker_locus14.27 cM
Citrus-P.trifoliata-consensus-2018.LG099_31364119_3136411marker_locus18.99 cM
Citrus-P.trifoliata-consensus-2018.LG099_32376709_3237670marker_locus20.02 cM
Citrus-P.trifoliata-consensus-2018.LG099_34464999_3446499marker_locus25.49 cM
Citrus-P.trifoliata-consensus-2018.LG099_37826359_3782635marker_locus28.37 cM
Citrus-P.trifoliata-consensus-2018.LG099_41597389_4159738marker_locus30.62 cM
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Map QTL
This map contains 14 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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