Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG077_208750407_20875040marker_locus106.99 cM
Citrus-P.trifoliata-consensus-2018.LG077_200932287_20093228marker_locus108.27 cM
Citrus-P.trifoliata-consensus-2018.LG088_1778988_177898marker_locus0 cM
Citrus-P.trifoliata-consensus-2018.LG088_5152478_515247marker_locus2.87 cM
Citrus-P.trifoliata-consensus-2018.LG088_3917168_391716marker_locus3.34 cM
Citrus-P.trifoliata-consensus-2018.LG088_7473688_747368marker_locus5.77 cM
Citrus-P.trifoliata-consensus-2018.LG088_11459268_1145926marker_locus8.84 cM
Citrus-P.trifoliata-consensus-2018.LG088_13228148_1322814marker_locus9.98 cM
Citrus-P.trifoliata-consensus-2018.LG088_19712938_1971293marker_locus14.41 cM
Citrus-P.trifoliata-consensus-2018.LG088_16994628_1699462marker_locus14.69 cM
Citrus-P.trifoliata-consensus-2018.LG088_14102078_1410207marker_locus15.44 cM
Citrus-P.trifoliata-consensus-2018.LG088_21066638_2106663marker_locus18.53 cM
Citrus-P.trifoliata-consensus-2018.LG088_23844458_2384445marker_locus22.37 cM
Citrus-P.trifoliata-consensus-2018.LG088_24757338_2475733marker_locus23.28 cM
Citrus-P.trifoliata-consensus-2018.LG088_27045728_2704572marker_locus27.34 cM
Citrus-P.trifoliata-consensus-2018.LG088_35804808_3580480marker_locus32.11 cM
Citrus-P.trifoliata-consensus-2018.LG088_37405238_3740523marker_locus32.52 cM
Citrus-P.trifoliata-consensus-2018.LG088_31361528_3136152marker_locus33.01 cM
Citrus-P.trifoliata-consensus-2018.LG088_40428348_4042834marker_locus35.16 cM
Citrus-P.trifoliata-consensus-2018.LG088_43101448_4310144marker_locus36.02 cM
Citrus-P.trifoliata-consensus-2018.LG088_45432258_4543225marker_locus37.34 cM
Citrus-P.trifoliata-consensus-2018.LG088_49528258_4952825marker_locus38.31 cM
Citrus-P.trifoliata-consensus-2018.LG088_56466728_5646672marker_locus39.46 cM
Citrus-P.trifoliata-consensus-2018.LG088_54944248_5494424marker_locus39.83 cM
Citrus-P.trifoliata-consensus-2018.LG088_60268658_6026865marker_locus40.51 cM
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Map QTL
This map contains 14 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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