Citrus-P.trifoliata-consensus-2018

Map Overview

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NameCitrus-P.trifoliata-consensus-2018
SpeciesPoncirus trifoliata
Analysis methodKosambi
Map typegenetic
Population size170
Map unitcM
Population size170
Number of loci647
Number of QTL14
Number of linkage groups9
Publication[view all]
ContactFrederick Gmitter
Stock
NameTypeDetails
C. sinensis_x_P. trifoliata-F1population
Description:data used for linkage map constuction based on SNP segregation between multiple intergeneric crosses (see pedigree)
Pedigree:Sanford x Argentina;Succari x Flying Dragon;Flying Dragon x Succari
Population size:170
Comments:mapping population
Contact
NameDetails
Frederick Gmitter
First name:Frederick
Last name:Gmitter
Title:Researcher
Institution:University of Florida
Address:Citrus Research and Education Center, University of Florida, Lake Alfred, FL 33850, USA
Country:USA
Email:fgmitter@ufl.edu
Last update:Nov 2018
Map Loci
This map contains 647 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Citrus-P.trifoliata-consensus-2018.LG011_83661741_8366174marker_locus48.67 cM
Citrus-P.trifoliata-consensus-2018.LG011_88332131_8833213marker_locus49.01 cM
Citrus-P.trifoliata-consensus-2018.LG011_104102701_10410270marker_locus49.38 cM
Citrus-P.trifoliata-consensus-2018.LG011_93879201_9387920marker_locus50.02 cM
Citrus-P.trifoliata-consensus-2018.LG011_158470201_15847020marker_locus51.73 cM
Citrus-P.trifoliata-consensus-2018.LG011_131519781_13151978marker_locus52.28 cM
Citrus-P.trifoliata-consensus-2018.LG011_139388811_13938881marker_locus52.53 cM
Citrus-P.trifoliata-consensus-2018.LG011_165680291_16568029marker_locus53.19 cM
Citrus-P.trifoliata-consensus-2018.LG011_128014061_12801406marker_locus53.31 cM
Citrus-P.trifoliata-consensus-2018.LG011_162570921_16257092marker_locus53.41 cM
Citrus-P.trifoliata-consensus-2018.LG011_146690571_14669057marker_locus53.94 cM
Citrus-P.trifoliata-consensus-2018.LG011_141157151_14115715marker_locus56.65 cM
Citrus-P.trifoliata-consensus-2018.LG011_179027451_17902745marker_locus56.87 cM
Citrus-P.trifoliata-consensus-2018.LG011_181249021_18124902marker_locus57.06 cM
Citrus-P.trifoliata-consensus-2018.LG011_174732981_17473298marker_locus57.5 cM
Citrus-P.trifoliata-consensus-2018.LG011_186914011_18691401marker_locus61.02 cM
Citrus-P.trifoliata-consensus-2018.LG011_195417091_19541709marker_locus61.98 cM
Citrus-P.trifoliata-consensus-2018.LG011_204427541_20442754marker_locus62.79 cM
Citrus-P.trifoliata-consensus-2018.LG011_209310121_20931012marker_locus64.04 cM
Citrus-P.trifoliata-consensus-2018.LG011_214809481_21480948marker_locus65.61 cM
Citrus-P.trifoliata-consensus-2018.LG011_223727861_22372786marker_locus66.79 cM
Citrus-P.trifoliata-consensus-2018.LG011_225005271_22500527marker_locus68.61 cM
Citrus-P.trifoliata-consensus-2018.LG011_228649601_22864960marker_locus71.28 cM
Citrus-P.trifoliata-consensus-2018.LG011_232294311_23229431marker_locus73.05 cM
Citrus-P.trifoliata-consensus-2018.LG011_227006181_22700618marker_locus74.22 cM
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Map QTL
This map contains 14 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2016QTL--27.9 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBCD.P.trifoliata-consensus.LG6.2015QTL--43.4 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015QTL--43.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2016QTL--47.8 cM
Citrus-P.trifoliata-consensus-2018.LG06qHLBFS.P.trifoliata-consensus.LG6.2015.2QTL--55.4 cM
Citrus-P.trifoliata-consensus-2018.LG07qHLBCD.P.trifoliata-consensus.LG7.2016QTL--35 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015QTL--39.5 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBCD.P.trifoliata-consensus.LG8.2015QTL--50.2 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2015.2QTL--54.9 cM
Citrus-P.trifoliata-consensus-2018.LG08qHLBFS.P.trifoliata-consensus.LG8.2016QTL--55.6 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBCD.P.trifoliata-consensus.LG9.2015QTL--59.5 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015QTL--66 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2015.2QTL--83.9 cM
Citrus-P.trifoliata-consensus-2018.LG09qHLBFS.P.trifoliata-consensus.LG9.2016QTL--83.9 cM
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