FC920826
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: RBP9X_DROME (Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster GN=RanBPM PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.267e-34 Identity = 73/202 (36.14%), Postives = 107/202 (52.97%), Query Frame = 2 Query: 119 VSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFD-----LKGVRSTERMKQQMTIEKISLPPNVSYGLVRSLLTHYGY 709 +S + L V Y V D V+ P P +YYFE+ + G G + IG T++ F+M R PGW+ S GYHGDDG + G G+ +GPTFTT D +G +N+ + F+TKNG +G ++D+ L+PT+ + + EEV NFGQ+ F FD +K +RS K + P N+ LV + L H + Sbjct: 433 LSQNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLYYFEVRIISKGRNGYMGIGLTAQQFRMNRLPGWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVNNTCFYTKNGVDLGIAFRDLPTKLYPTVGLQTPGEEVDANFGQEPFKFDKIVDMMKEMRSNVLRKIDRYPHLLETPENLMNRLVSTYLVHNAF 634
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: RBP10_DANRE (Ran-binding protein 10 OS=Danio rerio GN=ranbp10 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32 Identity = 71/206 (34.47%), Postives = 107/206 (51.94%), Query Frame = 2 Query: 110 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKGVRSTERMKQQMTIEKISLPPN------VSYGLVRSLLTHYGY 709 ++ +S + L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ+ F FD++ S R K I + + V +V S L H+GY Sbjct: 53 YIGLSQNNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGVAFTDLPPNLYPTVGLQTPGEIVDANFGQQPFVFDIEDYMSEWRAKIHSMIARFPIGERLGDWQAVLQNMVSSYLVHHGY 258
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: RBP10_MOUSE (Ran-binding protein 10 OS=Mus musculus GN=Ranbp10 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.793e-32 Identity = 71/206 (34.47%), Postives = 106/206 (51.46%), Query Frame = 2 Query: 110 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKGVRSTERMKQQMTIEKISLPPN------VSYGLVRSLLTHYGY 709 ++ +S L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ+ F FD++ R K Q T+ + V +V S L H+GY Sbjct: 93 YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHGFPISARLGEWQAVLQNMVSSYLVHHGY 298
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: RBP10_HUMAN (Ran-binding protein 10 OS=Homo sapiens GN=RANBP10 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.341e-32 Identity = 71/206 (34.47%), Postives = 106/206 (51.46%), Query Frame = 2 Query: 110 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKGVRSTERMKQQMTIEKISLPPN------VSYGLVRSLLTHYGY 709 ++ +S L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ+ F FD++ R K Q T+ + V +V S L H+GY Sbjct: 65 YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVHHGY 270
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: RBP10_BOVIN (Ran-binding protein 10 OS=Bos taurus GN=RANBP10 PE=2 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.341e-32 Identity = 71/206 (34.47%), Postives = 106/206 (51.46%), Query Frame = 2 Query: 110 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKGVRSTERMKQQMTIEKISLPPN------VSYGLVRSLLTHYGY 709 ++ +S L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ+ F FD++ R K Q T+ + V +V S L H+GY Sbjct: 65 YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVHHGY 270
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: RANB9_MOUSE (Ran-binding protein 9 OS=Mus musculus GN=Ranbp9 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.812e-32 Identity = 70/206 (33.98%), Postives = 106/206 (51.46%), Query Frame = 2 Query: 110 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKGVRSTERMKQQMTIEKISLP------PNVSYGLVRSLLTHYGY 709 ++ +S + L V Y D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ F FD++ R K Q I++ + + +V S L H+GY Sbjct: 102 YIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFDIEDYMREWRTKIQAQIDRFPIGDREGEWQTMIQKMVSSYLVHHGY 307
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: RANB9_HUMAN (Ran-binding protein 9 OS=Homo sapiens GN=RANBP9 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.812e-32 Identity = 70/206 (33.98%), Postives = 106/206 (51.46%), Query Frame = 2 Query: 110 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKGVRSTERMKQQMTIEKISLP------PNVSYGLVRSLLTHYGY 709 ++ +S + L V Y D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ F FD++ R K Q I++ + + +V S L H+GY Sbjct: 177 YIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFDIEDYMREWRTKIQAQIDRFPIGDREGEWQTMIQKMVSSYLVHHGY 382
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: RANB9_XENLA (Ran-binding protein 9 OS=Xenopus laevis GN=ranbp9 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.589e-31 Identity = 69/203 (33.99%), Postives = 105/203 (51.72%), Query Frame = 2 Query: 110 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKGVRSTERMKQQMTIEKISLP---PNVSYGLVRSLLTHYGY 709 +L +S L V Y D V++ P P ++YFE+ + G G + IG +++ + R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N F+TKNG +G + D+ L+PT+ + + E V NFGQ F FD++ R K Q IE+ + ++ +V S L H+GY Sbjct: 32 YLGLSHGNLRVHYKGHGKTSKDAASVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLIDNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQSPFVFDIEDYIREWRSKIQAQIERFPVAGEWQSMIQRMVSSYLVHHGY 234
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: RANB9_DANRE (Ran-binding protein 9 OS=Danio rerio GN=ranbp9 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.381e-31 Identity = 70/206 (33.98%), Postives = 105/206 (50.97%), Query Frame = 2 Query: 110 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKGVRSTERMKQQMTIEKISLPPN------VSYGLVRSLLTHYGY 709 ++ +S + L V Y D V+A P P VYYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N + F+TKNG +G + D+ L+PT+ + + E V NFGQ F FD++ R K Q I++ + + +V S L H+ Y Sbjct: 59 YIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGVYYFEVKIISKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQHPFVFDIEDYMREWRTKIQSQIDRFPIGEREGEWQAMIQKMVASYLVHHSY 264
BLAST of FC920826 vs. ExPASy Swiss-Prot
Match: RANB9_XENTR (Ran-binding protein 9 OS=Xenopus tropicalis GN=ranbp9 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.416e-31 Identity = 69/203 (33.99%), Postives = 105/203 (51.72%), Query Frame = 2 Query: 110 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYASQEFFFTKNGSLVGAVYKDIKGPLFPTIAVHSQNEEVLVNFGQKKFAFDLKGVRSTERMKQQMTIEKISLP---PNVSYGLVRSLLTHYGY 709 +L +S L V Y D V++ P P ++YFE+ + G G + IG +++ + R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N F+TKNG +G + D+ L+PT+ + + E V NFGQ F FD++ R K Q IE+ + ++ +V S L H+GY Sbjct: 32 YLGLSHGNLRVHYKGHGKTSKDAASVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLSRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLIDNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQSPFVFDIEDYIREWRTKIQAQIERFPVGGEWQSMIQRMVSSYLVHHGY 234 The following BLAST results are available for this feature:
BLAST of FC920826 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920826 ID=FC920826; Name=FC920826; organism=Citrus clementina; type=EST; length=710bpback to top |