FC920896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC920896 vs. ExPASy Swiss-Prot
Match: PP1_MEDVA (Serine/threonine-protein phosphatase PP1 OS=Medicago varia GN=PP1 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.411e-17 Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = 1 Query: 256 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 411 MD+TVLDDII++L+ AKNGRTTKQV LTEA+IRQLC ++KEIFLSQPNLLEL Sbjct: 1 MDDTVLDDIIKKLVSAKNGRTTKQVHLTEADIRQLCTSAKEIFLSQPNLLEL 52
BLAST of FC920896 vs. ExPASy Swiss-Prot
Match: PP16_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 6 OS=Arabidopsis thaliana GN=TOPP6 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 5.361e-17 Identity = 42/52 (80.77%), Postives = 45/52 (86.54%), Query Frame = 1 Query: 256 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 411 MDET+LDDIIRRLL NGRT KQ Q+TE EIRQLC ASKE+FLSQPNLLEL Sbjct: 1 MDETLLDDIIRRLLATNNGRTVKQAQITETEIRQLCLASKEVFLSQPNLLEL 52
BLAST of FC920896 vs. ExPASy Swiss-Prot
Match: PP13_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Arabidopsis thaliana GN=TOPP3 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.011e-15 Identity = 37/52 (71.15%), Postives = 49/52 (94.23%), Query Frame = 1 Query: 256 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 411 M+++V+DD+I+RLL AKNG+TTKQVQLTEAEI+ LC+ +K+IFL+QPNLLEL Sbjct: 1 MEDSVVDDVIKRLLGAKNGKTTKQVQLTEAEIKHLCSTAKQIFLTQPNLLEL 52
BLAST of FC920896 vs. ExPASy Swiss-Prot
Match: PP1_ORYSJ (Serine/threonine-protein phosphatase PP1 OS=Oryza sativa subsp. japonica GN=Os03g0268000 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 7.245e-14 Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 1 Query: 256 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 411 MD +LDDIIRRLL+ + R KQVQL+E+EIRQLC S+EIFLSQPNLLEL Sbjct: 15 MDAVLLDDIIRRLLEVRTARPGKQVQLSESEIRQLCTVSREIFLSQPNLLEL 66
BLAST of FC920896 vs. ExPASy Swiss-Prot
Match: PP12_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.463e-14 Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 1 Query: 256 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 411 ++ VLDDII RLL+ +N RT +QVQL+EAEIR LC ASKEIFL QPNLLEL Sbjct: 8 IEPAVLDDIINRLLEFRNARTVRQVQLSEAEIRSLCTASKEIFLHQPNLLEL 59
BLAST of FC920896 vs. ExPASy Swiss-Prot
Match: PP11_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Nicotiana tabacum GN=NPP1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.614e-13 Identity = 36/53 (67.92%), Postives = 45/53 (84.91%), Query Frame = 1 Query: 253 LMDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 411 L++ VLDDII RLL+ +N RT +QVQL+EAEIR LC+AS+EIFL QPNLL+L Sbjct: 14 LIEAGVLDDIINRLLEFRNARTVRQVQLSEAEIRSLCSASREIFLQQPNLLDL 66
BLAST of FC920896 vs. ExPASy Swiss-Prot
Match: PP1_MAIZE (Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.696e-13 Identity = 35/52 (67.31%), Postives = 43/52 (82.69%), Query Frame = 1 Query: 256 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 411 MD +LDD+IRRLL+ KN + K QL+E+EI+QLCAA+KEIFL QPNLLEL Sbjct: 1 MDPALLDDVIRRLLEVKNLKPGKNAQLSESEIKQLCAAAKEIFLQQPNLLEL 52
BLAST of FC920896 vs. ExPASy Swiss-Prot
Match: PP11_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Acetabularia cliftonii PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.044e-12 Identity = 34/52 (65.38%), Postives = 40/52 (76.92%), Query Frame = 1 Query: 256 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 411 MDE+ +DD+I RLL+ +N R KQVQLTE+EIR LC SKEI QPNLLEL Sbjct: 1 MDESTVDDVIERLLEVRNNRPGKQVQLTESEIRLLCLTSKEILSEQPNLLEL 52
BLAST of FC920896 vs. ExPASy Swiss-Prot
Match: PP12_ACECL (Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Acetabularia cliftonii PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.976e-12 Identity = 31/52 (59.62%), Postives = 41/52 (78.85%), Query Frame = 1 Query: 256 MDETVLDDIIRRLLDAKNGRTTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 411 M+E+ +DD+I RLL+ +N R KQV L E EIRQLC +K++F+SQPNLLEL Sbjct: 1 MEESAVDDVIERLLEVRNNRPGKQVNLAEGEIRQLCLTAKDVFMSQPNLLEL 52
BLAST of FC920896 vs. ExPASy Swiss-Prot
Match: PP11_ARATH (Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Arabidopsis thaliana GN=TOPP1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.192e-12 Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = 1 Query: 256 MDETVLDDIIRRLLDAKNGR--TTKQVQLTEAEIRQLCAASKEIFLSQPNLLEL 411 M+ VLDDIIRRL++ +N R + KQV L+E EIRQLCA SKEIFL QPNLLEL Sbjct: 15 MEPAVLDDIIRRLVEFRNTRPGSGKQVHLSEGEIRQLCAVSKEIFLQQPNLLEL 68 The following BLAST results are available for this feature:
BLAST of FC920896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC920896 ID=FC920896; Name=FC920896; organism=Citrus clementina; type=EST; length=412bpback to top |