CK934391
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934391 vs. ExPASy Swiss-Prot
Match: GME1_ORYSJ (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1) HSP 1 Score: 431.409 bits (1108), Expect = 2.550e-120 Identity = 209/223 (93.72%), Postives = 214/223 (95.96%), Query Frame = 1 Query: 97 MGSTE--GT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDARPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAF 756 MGS+E GT YG YTY ELERE YWPSEKLRIS+TGAGGFI SHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDA PAEPQDAYGLEKLA+EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAF Sbjct: 1 MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAF 223
BLAST of CK934391 vs. ExPASy Swiss-Prot
Match: GME1_ORYSI (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=1) HSP 1 Score: 429.098 bits (1102), Expect = 1.266e-119 Identity = 208/223 (93.27%), Postives = 213/223 (95.52%), Query Frame = 1 Query: 97 MGSTE--GT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDARPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAF 756 MGS+E GT YG YTY ELERE YWPSEKLRIS+TGAGGFI SHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDA PAEPQDAYGLEKLA+EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAF Sbjct: 1 MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNSVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAF 223
BLAST of CK934391 vs. ExPASy Swiss-Prot
Match: GME_ARATH (GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1) HSP 1 Score: 421.009 bits (1081), Expect = 3.446e-117 Identity = 200/222 (90.09%), Postives = 213/222 (95.95%), Query Frame = 1 Query: 97 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLE-TNVSLKESDARPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAF 756 MG+T GT YGAYTY+ELERE YWPSE L+IS+TGAGGFIASHIARRLK EGHY+IASDWKKNEHMTEDMFC EFHLVDLRVM+NCLKVT+GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNM+EA+RI+G+KRFFYASSACIYPEFKQLE TNVSLKESDA PAEPQDAYGLEKLA+EELCKHY KDFGIECR+GRFHNIYGPFGTWKGGREKAPAAF Sbjct: 1 MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAF 222
BLAST of CK934391 vs. ExPASy Swiss-Prot
Match: GME2_ORYSJ (GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2) HSP 1 Score: 419.853 bits (1078), Expect = 7.678e-117 Identity = 199/210 (94.76%), Postives = 205/210 (97.62%), Query Frame = 1 Query: 127 YTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDARPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAF 756 YTY ELE+EPYWP EKLRIS+TGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQL+T VSLKESDA PAEPQDAYGLEKLA+EELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAF Sbjct: 7 YTYVELEKEPYWPFEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLDTVVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAF 216
BLAST of CK934391 vs. ExPASy Swiss-Prot
Match: FCL_ECOLI (GDP-L-fucose synthetase OS=Escherichia coli (strain K12) GN=fcl PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.749e-12 Identity = 45/181 (24.86%), Postives = 83/181 (45.86%), Query Frame = 1 Query: 172 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEF-KQLETNVSLKESDARPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 711 K R+ + G G + S I R+L+ G + + ++ + H+F ++ +D V+ AA +GG+ + + +Y N MI N++ A+ + V + + S+CIYP+ KQ L + P + Y + K+A +LC+ Y + +G + R N+YGP Sbjct: 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFF------------ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPT--NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGP 169
BLAST of CK934391 vs. ExPASy Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase ytcB OS=Bacillus subtilis GN=ytcB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.143e-11 Identity = 55/189 (29.10%), Postives = 88/189 (46.56%), Query Frame = 1 Query: 175 LRISVTGAGGFIASHIARRL-KSEGHYIIASD--------WKKNEHMTEDMFCHEFHLVDLRVMDNCL-KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDARPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 711 ++I VTGA GFI SH+ L K + H +I D K +++ + F + ++ L + +GVD +F+LAA G ++ +N +LEA R ++ F +AS++ +Y E + K S+ P YG+ KL E+LC Y + FGI + RF +YGP Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIKENLLTADLASLLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQTFVFASTSSVYGEKQG-------KVSENTSLSPLSPYGVTKLTGEKLCHVYKQSFGIPIVILRFFTVYGP 182 The following BLAST results are available for this feature:
BLAST of CK934391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934391 ID=CK934391; Name=CK934391; organism=Citrus sinensis; type=EST; length=757bpback to top |